Gene Shel_06160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06160 
Symbol 
ID8394508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp721251 
End bp722003 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content59% 
IMG OID644985378 
Productuncharacterized component of anaerobic dehydrogenase 
Protein accessionYP_003143024 
Protein GI257063352 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAG AGATCAACCT CGTCTCGGTG ATGGAGGGCC GTCTGGCAAC GTACAGCATG 
CTGGCCCGCC TGTATCGCAA AGAGGTCGAC CAGGCCTATT TGGATAAGAT GCTCAAGATG
CGCTGCCCCG TGAACACCGG CAGTACCGAT GTGGACACGG GTTACCGCCT GTTCCACAAG
TATTTGAGCG GCGTATGGGA ACGCACCATG GAGGATTTGG ATCGCGACTA CCTGCGCACG
TTCATCGGTG CCAACACCAC GGGGCATTCC GCAGCGTATC CCAACGAATC CGTCCATACG
TCCCAGGACC GCCTGGTCAT GCAGGATGCG CGCGACGAAG TGCGCGCCAT CTACCGTGCG
GCAGGCCTCG AGAACTCGGA GGACTGGAAC CAAGGCGAGG ACCATATCGC TGTGGAGCTC
GAATACATGG CGGTTGAGAC GCGCCGCGCG CTTGCAGCGC TCAAGGAGGA CGACCTGCTT
ACTGCTTCTC GCGAAACGAT GCGCCAGTAC AACTTCCTGC GCGACCACCT GCTGTCGTGG
GTGCCGTTCA TGGTCAACGA CATGCTGAAG TTCGCCCAAA CCGATTTCTA CCGCGCATTG
GCATATCTGA CCCGCGGCTT CCTGGATGTG GACCGCGATT TTCTGGAGAA CGTGCTGCAG
GAGGAGCTTG AAGCGGAGCG GTTGATGAAG GGCGGGGAAG ACAGGGATGC ATCGGTCGAA
TCCGCGGAAG GCGAAGGAGA GCCTGCTGCT TAA
 
Protein sequence
MSKEINLVSV MEGRLATYSM LARLYRKEVD QAYLDKMLKM RCPVNTGSTD VDTGYRLFHK 
YLSGVWERTM EDLDRDYLRT FIGANTTGHS AAYPNESVHT SQDRLVMQDA RDEVRAIYRA
AGLENSEDWN QGEDHIAVEL EYMAVETRRA LAALKEDDLL TASRETMRQY NFLRDHLLSW
VPFMVNDMLK FAQTDFYRAL AYLTRGFLDV DRDFLENVLQ EELEAERLMK GGEDRDASVE
SAEGEGEPAA