| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_05650 |
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| Symbol | |
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| ID | 8394457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 655302 |
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| End bp | 658616 |
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| Gene Length | 3315 bp |
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| Protein Length | 1104 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644985327 |
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| Product | fibro-slime domain-containing protein |
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| Protein accession | YP_003142973 |
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| Protein GI | 257063301 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4932] Predicted outer membrane protein |
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| TIGRFAM ID | [TIGR02148] fibro-slime domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATGACG CGGAAGGTGA CGAGCCGACC AACGAAGGGG AAGAACCTGC TGTTGAAGAA
GACCCTGAGG CGCCTGAGGG TGACGATGGC GATCAGCCGG CCGAAGCCGA TGGTGAAGAA
ACGGAGCAGG CTGACAACCC TGAAGAGCAG GCTGACAACC CTGAGGGCGA GAAAGCCACG
GAAGACAAAG AGGCCAACAA GCCCGATGAC GCCGAAGCTC AGGCAAACGA CGCCATGCTG
AAGGCTCCGC CGCTGCGCGC GCCCAATGCG CCTGGTACCA TCAAAACGCT GGATACGGCC
AGCCTTGGCA TCGTGATGAA CCTGTTCGAC TACGAGGCCG AAGACTCGTT GAACAACAGC
TTCAATAACG ATAATGGCTA TAACCAAGCC ACTCAAAGCG GTATCAATTA CAGGAAGAGC
AGAGACAACC AGTTAAAGTT CTATGGAACC GGTGATGGTC GGGCATTGAA CTATAACGCG
CATACAGGTA ATTTTGGAAA CCCAGGAAAC GGAATCAACC AGTTCACTGG CGTTGGCCGA
AGCGATGGAG GGCAGTTCTA TACCGTCCAG GTGGCCAACC AGGGCATCTT GAATTCCACG
CTGACGGCTA CTGACGGCAC GGGTTACCCC ACGCTCAACA CCTATGCGAG CGATAAGTCT
TTGGAGTATC TGTTCAATCC CAATACGAGT GCAACCGGGA AGACGACCTA CAAGAACGTC
AACCATCTTT TCAAGCTCGA AAATGAAGGA ACTGCTCAAG AGCGTATGGT CTACGACAGC
AACAAAAACT ACGCCTATTA TTGCGATGAG GGCGAGACGA AAGACAACGG GGATTTCATA
GTCTACGACG GCACGTATGA CCGAGCAAAT GGCTCTAAAT CGGGAATGAA GTACGGATTC
TTCCCTTTCA ATGACTGGGG TACCGCGTCG GATTGTATCA ACCCAAACGA AACTAACAAT
GTGCAGGTTA CTTGGGACCC CAATAACCAT CCTGACCACC ACCTCGGTTT GACCATGACA
ACTCCGTTGA CCATGCCCCT CGATGGCCAA ATTACCAAAA ACGGACAAAC CGCCGATATG
ATCTTCGAAT TCAGCGGCGA CGATGACATG TGGGTGTTTA TCGATGGCAA GTTGGTGCTT
GACATCGGCG GTATCCATCA GCCTGTCTCG GGAACGATCA ACTTCCATAC GGGCGAGGTC
TCGCTTGGAA GCGGCACATC TACGCAGGTG GATGCCAATA ACAATTCGTA TACCCAAACC
AAGTACTCCT ATGCTGCAAA CAACATCGTC AATACAAACG TTCTTGGTGA CACAGCATGG
TTGTGGACCG AAAACGACCA TGAAGGCATT CTCGGTTCCA GAAACAGCGC CGAGAATCGC
GCCGGCACCG ACCATGTGCT GCAGGTGTTC TATCTGGAAC GCGGCGGCTG CGACTCGAAT
CTGAAGATTA GTACCAACAT CCATCTGATG ACCAAGAAAC AGGTCTCGGT TAAGAAAGAG
TGGGAAACCA CGCCTACCAC GTATCCGACC ACAAAGGTTC AACTCATTCG CAAAGCTGTG
GGTCGCGAAA ACAAGGACGA TGTTTCGTAT GCCGCTGTTG GTGCTCCCGT GGAGCTGAAT
AGCGGGAATA GCTGGGCAAA TGCCTGGTCT GACCTTCCGA GCGAAGGCTA CAACGCAACT
ACCATTTACG ACGAGGATAA TCCGAGCAAT AACGTCTATT GCGACTACAC GTATATGGTT
ATGGAAGTGC CCGTTGATGG TTACGCCCCC AGTTATACGG ACTCCACAAA CGCAAATCTT
GAAGTCACGG AGATTACTTA TCAGACCGAT GGCGGAAAGG CGACTGGCAA GGTCGTCTCG
ACCGACATGA GCAAAATGCC TATCACCATC ACCAATGTCG AGACTTATAT CGACGTCGAA
AAGCAATGGC TGGACGAAAA CGGCGGTGTT GAAAGAGCAA CGGTTCATGA CAACGATTCG
GTTTATGTGC AGCTGTATAA GCAGACCTAC GACAGCACCA ACGAAAAATG GGGCGACGAA
ACGGCCGTAG GTGATCCCGT CCAGTTGAAA AAGGATGCCT GGACGCACAA GTTCCCGATT
TCTGAAACCG GAGAGAACGT GCGCTACCTA GTTAAGGAAG GCGTGCTGGA TGGCGAGACA
TTTGTTCCGA AAACGACGCT GAGCACGACC AATGGTTCCT ATGCGTGGCA GTCTACCAAC
TACTACACCA CGACGCCGAC CTTCAATGGT TCTACGGTTG CGTGGGGAGA CGAAACCGCC
GCTGGCACAA CGGGTTATGT GTGCGTGCCC GAAAACGGCC GCGCCAGTGC GGTCATTACG
AATGCACCCT CGTACATCAC GGTTGAAAAA AAGTGGGTGG ATGCCGACGG CAACGACGAG
ACCGAAAAAC ACGCCAACGA TTCCGTATGG GTGCAGCTCT ACAAGGAGAC CAAAGAAGCG
AATGCCGAAT GGCTCGAAAC CCTGAATGGC ACTCCCGTTG GCGATCCCGT TCAGCTGAAG
GGCAGCGCTT GGTCGTCGAA GATCGTGATT CCTGCAACGG GAGAGAACAC CCGTTACTAC
GTTGAAGAAG GCACGATGGA CGGCAGCGGG TTCCATAAGT CGACTACGCT GACGACTTCC
GAAAATAAGA AGTACACCTG GAAATCCACC ACGTACTATG TGAGCGATAG CAAAGATGCC
CAAAACACTG ACTACTTCGT TATTCCCGAC GGTGAAACCG GTCATGCGGT TGTGGTGAAC
GAACCGGAGC TCACGAAAGT CACGCTGCTG AAGAAGGATG CCGACAACAA CGATCCGATG
CAGGGCGTTA CGTTCAAGCT GCTGAAGGAT AAGGAAGGCG GAGCAACCCC GGCTTTCGAT
GCGGCTCTGG ATACGGAAGT TGTTAAGGAC AACTTGACCA CGGGGTCCGG CGGCAAGGTT
GATTTGCCCA GCTTGAAGCC AGGCACTTAC TGGTTGGTTG AGACCGCAGC CCCCGAGGGA
TACATCGTTC GCGATGTAAA CCACCCCATA GGATTCGTCG TTGCCGACGA TGGCAAGGTC
AAGTTGATCG ATAGTACCTA CGACACCGAG AAGACGAAAC CCAGCATCAG CGGTTCGGAC
ACTACGTGGA CGCTGACCGC CAAGAACGTT CGCGTGTACT CGCTGCCGGA AGCCGGCGGT
CCGGGCATTT ACCTGTATCT GCTTATTGGC GCATTCATTG CGGGACTAGC TGCCATCAAT
ATGCGCTTCG GTTGGATTGA CGCGCGCCGC AGGCGTTCGT GCACGAACGG CGAGGATAGC
TTCCCCGGCG CATAG
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| Protein sequence | MDDAEGDEPT NEGEEPAVEE DPEAPEGDDG DQPAEADGEE TEQADNPEEQ ADNPEGEKAT
EDKEANKPDD AEAQANDAML KAPPLRAPNA PGTIKTLDTA SLGIVMNLFD YEAEDSLNNS
FNNDNGYNQA TQSGINYRKS RDNQLKFYGT GDGRALNYNA HTGNFGNPGN GINQFTGVGR
SDGGQFYTVQ VANQGILNST LTATDGTGYP TLNTYASDKS LEYLFNPNTS ATGKTTYKNV
NHLFKLENEG TAQERMVYDS NKNYAYYCDE GETKDNGDFI VYDGTYDRAN GSKSGMKYGF
FPFNDWGTAS DCINPNETNN VQVTWDPNNH PDHHLGLTMT TPLTMPLDGQ ITKNGQTADM
IFEFSGDDDM WVFIDGKLVL DIGGIHQPVS GTINFHTGEV SLGSGTSTQV DANNNSYTQT
KYSYAANNIV NTNVLGDTAW LWTENDHEGI LGSRNSAENR AGTDHVLQVF YLERGGCDSN
LKISTNIHLM TKKQVSVKKE WETTPTTYPT TKVQLIRKAV GRENKDDVSY AAVGAPVELN
SGNSWANAWS DLPSEGYNAT TIYDEDNPSN NVYCDYTYMV MEVPVDGYAP SYTDSTNANL
EVTEITYQTD GGKATGKVVS TDMSKMPITI TNVETYIDVE KQWLDENGGV ERATVHDNDS
VYVQLYKQTY DSTNEKWGDE TAVGDPVQLK KDAWTHKFPI SETGENVRYL VKEGVLDGET
FVPKTTLSTT NGSYAWQSTN YYTTTPTFNG STVAWGDETA AGTTGYVCVP ENGRASAVIT
NAPSYITVEK KWVDADGNDE TEKHANDSVW VQLYKETKEA NAEWLETLNG TPVGDPVQLK
GSAWSSKIVI PATGENTRYY VEEGTMDGSG FHKSTTLTTS ENKKYTWKST TYYVSDSKDA
QNTDYFVIPD GETGHAVVVN EPELTKVTLL KKDADNNDPM QGVTFKLLKD KEGGATPAFD
AALDTEVVKD NLTTGSGGKV DLPSLKPGTY WLVETAAPEG YIVRDVNHPI GFVVADDGKV
KLIDSTYDTE KTKPSISGSD TTWTLTAKNV RVYSLPEAGG PGIYLYLLIG AFIAGLAAIN
MRFGWIDARR RRSCTNGEDS FPGA
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