Gene Shel_04330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04330 
Symbol 
ID8394325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp517814 
End bp518449 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content61% 
IMG OID644985197 
Productuncharacterized component of anaerobic dehydrogenase 
Protein accessionYP_003142843 
Protein GI257063171 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0098703 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCCAGG AGCAGACATA CCAGGGCATT GCAGCAGCGG CCCGCATGCT GGGCCTGCTG 
TTCTCGTGCG ACCCGAAGCT CGACGACGAA TCGCCGGAGC TGTTCGCGAC CATTGCGAAC
ATGGATGCGG ACGAAACGGC CGCCGAATGG CCGGGCGTGG ATGCAGGAAA GGCAAGCGCG
CTGCTGCTTG ACCTGCAGAA GAACGCTCCG GCCGACCACA GCGAGCTTGC ATCCGCATAC
CGTCATCTGT TTGTGGGTCC TACCAAACTG GCGGCTCCGC CGTACGGTTC GGTATACACT
GACCGCGATC AGGTTGTGTT CGGCGAGTCC ACGATTGCCC TTCGCACATG GATGCGCAGG
GCTGGTATCG GTGCAGACGG CTTGGACGGC GCTCCTGAGG ACCATATCGG CACCATGCTC
CTGCTGCTTT CGTGGCTGGT GGAGCATAAG CCAGAGCTGG TTGAGGAATA CTTGACGGAT
CACCTGCTCA CGTGGGCTCC GCATTACCTC GACGAGCTGG AAGAAGCTGC TGAAGGTGGG
TTCTACGGCA CCTTGGCGCG GCTTGCGAAT GAAACGCTTA CCGGGATCGA GGACGAGCTT
GACCTCCAGG TCGAGCTCCC TCGGTTCTAC CGATAA
 
Protein sequence
MAQEQTYQGI AAAARMLGLL FSCDPKLDDE SPELFATIAN MDADETAAEW PGVDAGKASA 
LLLDLQKNAP ADHSELASAY RHLFVGPTKL AAPPYGSVYT DRDQVVFGES TIALRTWMRR
AGIGADGLDG APEDHIGTML LLLSWLVEHK PELVEEYLTD HLLTWAPHYL DELEEAAEGG
FYGTLARLAN ETLTGIEDEL DLQVELPRFY R