Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_04330 |
Symbol | |
ID | 8394325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 517814 |
End bp | 518449 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644985197 |
Product | uncharacterized component of anaerobic dehydrogenase |
Protein accession | YP_003142843 |
Protein GI | 257063171 |
COG category | [R] General function prediction only |
COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0098703 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCCAGG AGCAGACATA CCAGGGCATT GCAGCAGCGG CCCGCATGCT GGGCCTGCTG TTCTCGTGCG ACCCGAAGCT CGACGACGAA TCGCCGGAGC TGTTCGCGAC CATTGCGAAC ATGGATGCGG ACGAAACGGC CGCCGAATGG CCGGGCGTGG ATGCAGGAAA GGCAAGCGCG CTGCTGCTTG ACCTGCAGAA GAACGCTCCG GCCGACCACA GCGAGCTTGC ATCCGCATAC CGTCATCTGT TTGTGGGTCC TACCAAACTG GCGGCTCCGC CGTACGGTTC GGTATACACT GACCGCGATC AGGTTGTGTT CGGCGAGTCC ACGATTGCCC TTCGCACATG GATGCGCAGG GCTGGTATCG GTGCAGACGG CTTGGACGGC GCTCCTGAGG ACCATATCGG CACCATGCTC CTGCTGCTTT CGTGGCTGGT GGAGCATAAG CCAGAGCTGG TTGAGGAATA CTTGACGGAT CACCTGCTCA CGTGGGCTCC GCATTACCTC GACGAGCTGG AAGAAGCTGC TGAAGGTGGG TTCTACGGCA CCTTGGCGCG GCTTGCGAAT GAAACGCTTA CCGGGATCGA GGACGAGCTT GACCTCCAGG TCGAGCTCCC TCGGTTCTAC CGATAA
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Protein sequence | MAQEQTYQGI AAAARMLGLL FSCDPKLDDE SPELFATIAN MDADETAAEW PGVDAGKASA LLLDLQKNAP ADHSELASAY RHLFVGPTKL AAPPYGSVYT DRDQVVFGES TIALRTWMRR AGIGADGLDG APEDHIGTML LLLSWLVEHK PELVEEYLTD HLLTWAPHYL DELEEAAEGG FYGTLARLAN ETLTGIEDEL DLQVELPRFY R
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