| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_03830 |
|---|
| Symbol | |
|---|
| ID | 8394275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 455028 |
|---|
| End bp | 455609 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644985147 |
|---|
| Product | transcriptional regulator, tetR family |
|---|
| Protein accession | YP_003142793 |
|---|
| Protein GI | 257063121 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACA CGAAGGACCT GCGCTACGTT CGCACCGAAG AGGCCATCCG AAAAGCCTTC
ATGGACCTGG TGGGCGAAAC GCCGATTGCG TCGATTACGG CGAGCGCCGT TTGCCGCCGC
GCAGGAATAA GCCGCAACGC GTTCTATCTG CACCACGCCA GCGTGTCAGA CCTGTACGCC
GCGATGGTCG GCGAGCTCGT GAACGACGTG CGCACCGAAA GCCTATCTTC GGCGGAGCGC
CGAGCCAGCA CGGGTGCCGA CGACGCGTTT TACGAGTCGA TCGTCATGTC GCTCGCCCGC
CACGAGAACC TGCTGCGCGC CCTGCTGCCT TCCGACGACG GCTCGCTCGC AAAATGCCTG
GCAGATGGCA TAGAAGCCGC ATTTATCGAA GCGGCTCTGC ATTTTGGCGA GCGCGGAGGC
AGCTTCGAGC ATCAACTGCA CTGTGCCTAT GCCGCCTGGG CGCTGGTGGG GTTCGCCTCC
CGATGGATCG CAGACACCGA CCGTCCTCTT CCGGAAGGCC TCGAGACATT CCAGGAGCTC
CACGAAAGCG CCGTGAACGC ATCGGTCCGC TTCCTCATGT AG
|
|---|
| Protein sequence | MTNTKDLRYV RTEEAIRKAF MDLVGETPIA SITASAVCRR AGISRNAFYL HHASVSDLYA
AMVGELVNDV RTESLSSAER RASTGADDAF YESIVMSLAR HENLLRALLP SDDGSLAKCL
ADGIEAAFIE AALHFGERGG SFEHQLHCAY AAWALVGFAS RWIADTDRPL PEGLETFQEL
HESAVNASVR FLM
|
|---|
| |