Gene Shel_02340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_02340 
Symbol 
ID8394126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp284686 
End bp284994 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content63% 
IMG OID644985005 
Productconserved hypothetical protein TIGR00103 
Protein accessionYP_003142651 
Protein GI257062979 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.001975 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGA AGCAGATGAT GCGCCAGGCC CAGAAGATGC AGGCCGAGCT TGCCAAGGCC 
CAGGACGAGA TCAAGGACAT GACCGCCGAA GCCACCGCAG GTGGCGGCAT GGTGACCGTC
GTGGCCACCG GCAACAACGA GATCCAGTCC ATTAAGATCG ACCCCGCAGC CGTGGATCCC
GAGGATGTCG AGATGCTGGA GGACATGGTT CTCGCGGCGG CCAACGAGGC CCTGCGCGCC
GTGGCTGCCA AGGGTACCGC ACGCCTGAAC AGCGTCACCG GCGGCATGAA CATCCCTGGC
CTGATGTAG
 
Protein sequence
MDMKQMMRQA QKMQAELAKA QDEIKDMTAE ATAGGGMVTV VATGNNEIQS IKIDPAAVDP 
EDVEMLEDMV LAAANEALRA VAAKGTARLN SVTGGMNIPG LM