| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_4102 |
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| Symbol | |
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| ID | 4457558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4988073 |
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| End bp | 4989008 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639704872 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_848202 |
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| Protein GI | 116751515 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.422713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACTG AAAAATTGAC CGTCGCGCTG CTCTCGGGTG GGGCGTCCGC GGAACGTGAA
GTTTCGTTGA AAAGCGGGGA ACAGGTTTTC AATGCGCTGG ACAAGCAGCG TTACCTCGTC
CTCCGCTACG ACCCGGCTCA CGATCTGACG CGCCTTGCGG CAGACGCGGA AAAGATCGAC
GTGGCGCTGA TCATTCTGCA CGGCAGAATG GGCGAAGACG GAACGATCCA GGGACTGCTC
GAGTCTCTGG GAATTCCCTA CCAGGGGAGC GGCGTTCTGG GGAGCGCCGT GGCAATGAAC
AAGATTTTGA GCAAGCAGCT TTACATCCAC GCCGGCCTCC CGGTCGCTCC ACACCTGGTG
GCGGACCGGC GGGAACCGCC GGATCTCGAT ACCGTGGCGG ACCGTCTCGG GCTGCCGGTG
GTGGTCAAGC CGGAGCACGA AGGGTCGAGC ATCGGGCTGA GCATCGTCAG GAACCGGGAC
CAGCTCGCTG CAGCGGTCGA AACCGGCTGG CAATACGACC GACGCTGCCT CATCGAGAAA
TACGTTCACG GCATCGAGAT AACGGGCGGG GTGCTGGGAA ATGATCATCT GCAGGCGCTG
CCGCTGATCG AAATCATCCC CGGCGAAGCC TATGAGTTTT TCGACTACAA AGCGAAGTAC
ACTCCCGGAG CCTCCAGGGA AATCTGTCCT GCCAGGCTCT CCGACACCAT CACGGCCAAA
GCGCAGGAAT ACGCGAGGAA AGCGCACCAG GCGCTGTGCT GCAAGGGGTA CAGCAGAACC
GACATGATCG TGTCGGGCAA TGACATCTTC ATTCTCGAGA CCAACACGAT CCCCGGCATG
ACTGCAACCA GCCTGTTTCC ACAGGCGGCG GCGGTGGCCG GCATTTCCTT TTCCGCTCTA
CTGGATCGCC TGATCGAACT GGCTCTGGAA GACTGA
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| Protein sequence | MSTEKLTVAL LSGGASAERE VSLKSGEQVF NALDKQRYLV LRYDPAHDLT RLAADAEKID
VALIILHGRM GEDGTIQGLL ESLGIPYQGS GVLGSAVAMN KILSKQLYIH AGLPVAPHLV
ADRREPPDLD TVADRLGLPV VVKPEHEGSS IGLSIVRNRD QLAAAVETGW QYDRRCLIEK
YVHGIEITGG VLGNDHLQAL PLIEIIPGEA YEFFDYKAKY TPGASREICP ARLSDTITAK
AQEYARKAHQ ALCCKGYSRT DMIVSGNDIF ILETNTIPGM TATSLFPQAA AVAGISFSAL
LDRLIELALE D
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