Gene Sfum_3905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3905 
Symbol 
ID4457760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4755201 
End bp4756406 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content59% 
IMG OID639704678 
Productglycosyltransferase family 28 protein 
Protein accessionYP_848009 
Protein GI116751322 
COG category[R] General function prediction only 
COG ID[COG4671] Predicted glycosyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0957738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCAG TCAAGCCACT GAAAATCCTG ATTTACTCCC ACGATACATA TGGCCTCGGG 
CACATCCGCA GATGTCTCGC CATTGCCCGC AGCCTTCGTA ACTGCCCGGC GAACGTCCTC
ATCCTGACGG GTTCCATCCT TGCCGGTCGG TTCAAGATTC CAAGCCGCAT CGACTTCGTG
CGGATTCCCG GCATGATCAA GGTGACCAAC GAGGAGTACA TGCCGCTTTC CATGAAACTG
GATGCCGCGG AAGTGCTCGA GATCAGAAAG CGGATCATCC TTGCCACCGC CATGGCCTTC
CAACCGGATT TCTTCATTGT CGACAAGGCT CCGCTCGGTT TGAAAAAGGA AGTCGTGGAC
ACCCTCCACT GGCTGAAGAC GGACTGTCCC TCCTGCACCT CCATCCTCGG GTTGCGGGAC
ATCATGGACA GCGCCACGTC CACCATCGAG GACTGGACGG AAAAGGGAAT ATACGATGCC
ATGGAAGCGC TCTACGACGA GGTTTGGGTG TATGGCTGCC GTGAATACTA CGACCCCGTC
AAGGAGTACG AGATCCCGGA GCCTGTGGCC CGGAAGATCC ATTTCACCGG GTATATTCCC
AGGCAGATCC CGACCAGGGA CAAGATTATG GCCACGAGGC AATCCCTGGG AATCGGCCCC
AAGGAAAAGC TGATCGTGGT GACGACCGGA GGCGGGGGAG ACGGGCATCC GGTGGTGCAT
ACGTTCCTTT CGGCATTTGA GAATGAAAGG GGTGGCGTCC CGCCGCGCAC TCGAGTGGTC
ATCGTGACGG GCCCCTTCGT TTCCTCGGCG GATTACCAGG ACGTTGTGAG GCGGTGCGAG
GCCCTCGGGT TCACCTCCTT GAAATTCCAC CGCTCCATGG AACGGCTGAT CGGCGCCGCC
CAGGTTGTGG TCAGCATGGG GGGGTACAAT ACGGTATGTG AAATCGCGAG CCAGAAGAAA
CCGCTGCTGA TCGTGCCCAG GGCGGTGCCT CGCGAGGAGC AGTTGATCAG GGCCCAGGTG
CTGTGCGGCC TGGGGTTCTG CGACTACCTG GACCCGCGGG AACTGAACCC GCAATCCCTC
CGCGACAAGA TCCTCAATTT GCTCAACGGC GGCGCAACAT GCCACCAGGC GGGGGATCTG
CCCTTCACCG CCCTGGATGT CATCCGCAAG CGCATTTCGG AGGACAGAAA AGGGAATCGG
GAGTGA
 
Protein sequence
MSAVKPLKIL IYSHDTYGLG HIRRCLAIAR SLRNCPANVL ILTGSILAGR FKIPSRIDFV 
RIPGMIKVTN EEYMPLSMKL DAAEVLEIRK RIILATAMAF QPDFFIVDKA PLGLKKEVVD
TLHWLKTDCP SCTSILGLRD IMDSATSTIE DWTEKGIYDA MEALYDEVWV YGCREYYDPV
KEYEIPEPVA RKIHFTGYIP RQIPTRDKIM ATRQSLGIGP KEKLIVVTTG GGGDGHPVVH
TFLSAFENER GGVPPRTRVV IVTGPFVSSA DYQDVVRRCE ALGFTSLKFH RSMERLIGAA
QVVVSMGGYN TVCEIASQKK PLLIVPRAVP REEQLIRAQV LCGLGFCDYL DPRELNPQSL
RDKILNLLNG GATCHQAGDL PFTALDVIRK RISEDRKGNR E