Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3905 |
Symbol | |
ID | 4457760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4755201 |
End bp | 4756406 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639704678 |
Product | glycosyltransferase family 28 protein |
Protein accession | YP_848009 |
Protein GI | 116751322 |
COG category | [R] General function prediction only |
COG ID | [COG4671] Predicted glycosyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0957738 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGCAG TCAAGCCACT GAAAATCCTG ATTTACTCCC ACGATACATA TGGCCTCGGG CACATCCGCA GATGTCTCGC CATTGCCCGC AGCCTTCGTA ACTGCCCGGC GAACGTCCTC ATCCTGACGG GTTCCATCCT TGCCGGTCGG TTCAAGATTC CAAGCCGCAT CGACTTCGTG CGGATTCCCG GCATGATCAA GGTGACCAAC GAGGAGTACA TGCCGCTTTC CATGAAACTG GATGCCGCGG AAGTGCTCGA GATCAGAAAG CGGATCATCC TTGCCACCGC CATGGCCTTC CAACCGGATT TCTTCATTGT CGACAAGGCT CCGCTCGGTT TGAAAAAGGA AGTCGTGGAC ACCCTCCACT GGCTGAAGAC GGACTGTCCC TCCTGCACCT CCATCCTCGG GTTGCGGGAC ATCATGGACA GCGCCACGTC CACCATCGAG GACTGGACGG AAAAGGGAAT ATACGATGCC ATGGAAGCGC TCTACGACGA GGTTTGGGTG TATGGCTGCC GTGAATACTA CGACCCCGTC AAGGAGTACG AGATCCCGGA GCCTGTGGCC CGGAAGATCC ATTTCACCGG GTATATTCCC AGGCAGATCC CGACCAGGGA CAAGATTATG GCCACGAGGC AATCCCTGGG AATCGGCCCC AAGGAAAAGC TGATCGTGGT GACGACCGGA GGCGGGGGAG ACGGGCATCC GGTGGTGCAT ACGTTCCTTT CGGCATTTGA GAATGAAAGG GGTGGCGTCC CGCCGCGCAC TCGAGTGGTC ATCGTGACGG GCCCCTTCGT TTCCTCGGCG GATTACCAGG ACGTTGTGAG GCGGTGCGAG GCCCTCGGGT TCACCTCCTT GAAATTCCAC CGCTCCATGG AACGGCTGAT CGGCGCCGCC CAGGTTGTGG TCAGCATGGG GGGGTACAAT ACGGTATGTG AAATCGCGAG CCAGAAGAAA CCGCTGCTGA TCGTGCCCAG GGCGGTGCCT CGCGAGGAGC AGTTGATCAG GGCCCAGGTG CTGTGCGGCC TGGGGTTCTG CGACTACCTG GACCCGCGGG AACTGAACCC GCAATCCCTC CGCGACAAGA TCCTCAATTT GCTCAACGGC GGCGCAACAT GCCACCAGGC GGGGGATCTG CCCTTCACCG CCCTGGATGT CATCCGCAAG CGCATTTCGG AGGACAGAAA AGGGAATCGG GAGTGA
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Protein sequence | MSAVKPLKIL IYSHDTYGLG HIRRCLAIAR SLRNCPANVL ILTGSILAGR FKIPSRIDFV RIPGMIKVTN EEYMPLSMKL DAAEVLEIRK RIILATAMAF QPDFFIVDKA PLGLKKEVVD TLHWLKTDCP SCTSILGLRD IMDSATSTIE DWTEKGIYDA MEALYDEVWV YGCREYYDPV KEYEIPEPVA RKIHFTGYIP RQIPTRDKIM ATRQSLGIGP KEKLIVVTTG GGGDGHPVVH TFLSAFENER GGVPPRTRVV IVTGPFVSSA DYQDVVRRCE ALGFTSLKFH RSMERLIGAA QVVVSMGGYN TVCEIASQKK PLLIVPRAVP REEQLIRAQV LCGLGFCDYL DPRELNPQSL RDKILNLLNG GATCHQAGDL PFTALDVIRK RISEDRKGNR E
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