Gene Sfum_3481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3481 
Symbol 
ID4458218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4253336 
End bp4254265 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content61% 
IMG OID639704253 
Producthypothetical protein 
Protein accessionYP_847587 
Protein GI116750900 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.16006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.23992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGAAC TCGCGGTTTT TTTGAAGTCT GTGAGGCTGG AGCGCGGGAT CACCCTGGAT 
TCCATCTCCC GGAACACGGG GATGAGCCTG AGCACGCTCA AGGCATTGGA AGCGGCCAAT
TGGGACAAGC TCGACAGCCT GCTCCTGGTC AAGAATTTCG TGCGCGCCTA TTGTTCGGCC
CTGGGGATCG ATTCTGCGGC GGTCCTTGAA AAATATGCCG CGGATATTCG GGCCTGCAAT
CGGCAGAATG AATACCTCGC ACGGTATGCG AAGTGGAGCA AAGTCAAGCG TTCAAGGAAG
CGTTTGGGAC CGTTTGGAAT GCTCTTGCTG GGGATAGGGT TGTCCGGCCT CGCGTCAGGC
GGGGTTTGGA TTGCCGAGAA ACGTGCCCGG GTGAGCCAGA CGCCTCCGAT TGCCAAGACG
GTTTACAGCC AGCAGGAATT TCCCACCGAT CTTCCGGTCA GAGCGAATCC CGTCGCAAAG
CCCGAACCGA AAGTGGAGCC GGCACCTGTC GCGCCCGTCG TCGAAACCGC GGCGGCTCCT
GCGGTGAAGG AACCCGCGGA GACCCCGGTT CAACAAGAGG TTGTCGAGGC GGGGGAAGTC
AGGACCGCCC AGGCGAGCGG CCTTCCCAAC GAGGTGCTTG CCGCCGGCGA GCCCGCTGGT
CCGTCCGAAA CCGCCAGGAA GCACGTCTTT GCGGTGGCGG CTTCCGAGAA GACCTGGATC
CAGGTGGAAA TGGACGGCAG GATCACTCAG AGTGCCATGT TGCACCCGGG TGAGACGCGG
GAATGGAAAG CCGAGAAGGG CATGCGCGTC GTGGTGGGCA ACCTTGGCGG CGTCCGCATG
AGTTGGAACG GACGTCCCGT CGATGCCCCG GGAAGATCGG GGCAGGTCCT GCGCTTTCAC
CTTCCGGACC CGCAGTATGT GAAAGAATAG
 
Protein sequence
MRELAVFLKS VRLERGITLD SISRNTGMSL STLKALEAAN WDKLDSLLLV KNFVRAYCSA 
LGIDSAAVLE KYAADIRACN RQNEYLARYA KWSKVKRSRK RLGPFGMLLL GIGLSGLASG
GVWIAEKRAR VSQTPPIAKT VYSQQEFPTD LPVRANPVAK PEPKVEPAPV APVVETAAAP
AVKEPAETPV QQEVVEAGEV RTAQASGLPN EVLAAGEPAG PSETARKHVF AVAASEKTWI
QVEMDGRITQ SAMLHPGETR EWKAEKGMRV VVGNLGGVRM SWNGRPVDAP GRSGQVLRFH
LPDPQYVKE