| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3454 |
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| Symbol | |
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| ID | 4458226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4219584 |
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| End bp | 4221554 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639704226 |
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| Product | acetate--CoA ligase |
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| Protein accession | YP_847560 |
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| Protein GI | 116750873 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00139628 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGATGACA TCCGCGGGCC CGATCGGGCA AGTTCGATTT CAACCGGAGT TCGAGTCTGG
CCTTCGAAGC GATACGCGAA GATGCATCGG GATTCCATAG AGGATCCGGA GGCCTTCTGG
GATCAGCAGG CCAGAAAACT TGAATGGCAA AAAACATGGG ACCACGTCTT GGAGTGGAAG
GAACCCTACG GGCGGTGGTT CGTCGGTGGA AAGCTGAACG CCTGCCACCA ATGCGTCGAC
AGGCATGTTC ACACATGGCG GCGAAGCAAG GTGGCCATCT ATTGGGAGGG TGAGAACGGA
GAGACCCGGG TACTGAGTTA TTCCACGCTC TTCCGCGAGG TCAACCATTT CGCCCATATG
CTCCTCAGCC TCGGCGTGAC GAAAGGGGAC CGGGTCGCCC TCTATCTTCC GATGATCCCT
GAGCTTCCCG TTGCGATGCT TGCCTGTGCC CGAATCGGAG CCGTGCACAC GGTCATCTTT
TCGGGCTTCA GCGCGCAGGC GATCTGCGGC AGAATCGGAG ACACCCGGGC CAAGGTGATC
GTCACCTCCG ACGGAGGCCT TCGCAGAGGA AAGATCGTGC CCCTCAAGGA TATCGTGGAC
CAGGCGCTTC CCGCCTGCCC CAGCGTGGAA AACGTCATCG TGGTCCGGCG GACGGGACAG
GCGATTCACA TGCGGGAAGG ACGCGACCAT TGGCTTTCCA AGGACATGAC CGGTGCTCAT
GTGTTCGTGG AACCCGTCGC GGTGGAATCA TCCCACCCGC TCTATGTCCT CTACACTTCG
GGAACGACCG GCAAGCCGAA GGGAATCGTG CACGGCACCG GCGGTTACAT GGTGTTCAAC
TACGTCGCCT ACCAGTGGGT GTTCGACATC AGGGAGGAAT CCGTTTACTG GTGCACCGCG
GACGTGGGCT GGGTTACCGG GCACAGCCAG ATCGTTTATG CCCCGCTCTC GCACGGCGCG
GCGGTCGTTC TCTACGAGGG GGCTCCGGAC TATCCCGCGG TCGATCGGTG GTGGGATATC
ATCGAGAAAT ACGGAGTCAG CATCTTCTAC ACTTCTCCCA CGGCCATCCG CATGTTCATG
CGTCACGGCG AGAAGTGGCC GGCCAGGCAC GACATGTCCA GTCTCAATCT CCTGGGCAGC
GTGGGGGAAC CCATCAACCC GGAGGCCTGG TACTGGTATT TCAGACATAT CGGAGGGGAG
CGCTGTCCCA TTGTTGACAC GTGGTGGCAG ACGGAGACGG GCGGCATCAT GATTTCGCCC
ACTCCGGGCA TCGACCCGCT CGCCCTCAAG CCGGGATCGG CGACATTTCC CCTCCCGGGC
GTCGATGTGG CCGTGGTGGA CGCCCGGGGC AACGAGCTCG AAGCCGGCGA AACCGGGTAC
CTGATCATCA GAAAACCCTG GCCGGGTATG TTGCTCGACG TTTACGAAGA TCCCGCGCGT
TACCGGGAAG CCTACTGGTC CCGCTTTCCC GGGTCTTACT ATACCGGGGA TTTTGCCATG
CGCGATGAGG ACGGTTACTT CTGGCTGCTG GGCAGGGCGG ATGAAGTCCT GAAGGTGGCG
GGACACCGAC TGGGAACCGC GGAGATCGAA GACGCCGCCA TTGCCCACCC CGCGGTGGCA
GAAGCGGGCG TCACCGGAAG GCCTGATGAG CTGAAGGGTG AAACGATCGT GCTGTTCGTC
ACCCTCAAGG AAGGCATCCC CCCTTCGGAT GCGCTGAAAA AAGAGATTGC GGACCTGTTG
CGGGAGACGA TCGGCCCCGT GGCCGCCCCG GGCGAAATGT ATTTCGTGGA TTCCATCCCC
AAGACCAGAA GCGGCAAGAT CATGCGCCGG GTTCTCAAGG CAGTCGCTTC GGGAAAGGAT
ATCGGAGACC TGACGACCCT GGAAGACGAG GCATCCGTCG AAGAAGTGCG CAACGCGCTG
GCGCGTCTTG GTCATACCGG TGCGCCGCCG CCCGCAGATT CCTCCCATTG A
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| Protein sequence | MDDIRGPDRA SSISTGVRVW PSKRYAKMHR DSIEDPEAFW DQQARKLEWQ KTWDHVLEWK
EPYGRWFVGG KLNACHQCVD RHVHTWRRSK VAIYWEGENG ETRVLSYSTL FREVNHFAHM
LLSLGVTKGD RVALYLPMIP ELPVAMLACA RIGAVHTVIF SGFSAQAICG RIGDTRAKVI
VTSDGGLRRG KIVPLKDIVD QALPACPSVE NVIVVRRTGQ AIHMREGRDH WLSKDMTGAH
VFVEPVAVES SHPLYVLYTS GTTGKPKGIV HGTGGYMVFN YVAYQWVFDI REESVYWCTA
DVGWVTGHSQ IVYAPLSHGA AVVLYEGAPD YPAVDRWWDI IEKYGVSIFY TSPTAIRMFM
RHGEKWPARH DMSSLNLLGS VGEPINPEAW YWYFRHIGGE RCPIVDTWWQ TETGGIMISP
TPGIDPLALK PGSATFPLPG VDVAVVDARG NELEAGETGY LIIRKPWPGM LLDVYEDPAR
YREAYWSRFP GSYYTGDFAM RDEDGYFWLL GRADEVLKVA GHRLGTAEIE DAAIAHPAVA
EAGVTGRPDE LKGETIVLFV TLKEGIPPSD ALKKEIADLL RETIGPVAAP GEMYFVDSIP
KTRSGKIMRR VLKAVASGKD IGDLTTLEDE ASVEEVRNAL ARLGHTGAPP PADSSH
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