Gene Sfum_3235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3235 
Symbol 
ID4458438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3957732 
End bp3958547 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content59% 
IMG OID639704007 
Productmethyltransferase type 11 
Protein accessionYP_847343 
Protein GI116750656 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATGCA TCGAGTACCT GATGGAAAGC GAGGATGAGG CGACCCGTCT GGAAATGAAG 
ACGGATTGCC GGTCCGTTGA GGCGCAGGCC CTCTGGGCGG GCCTCGGGCC GGGAATGCGG
GTCGCGGACA TCTGCTGCGG AACGGGCAAG ACCAGCGCGT GCCTGAACGC GCTGGTTCAA
CCGGGGGGAA CGGTGATCGG AATCGACGGA TCCCCCGAGA GGGTCGCTTA CGCCGTCGAT
CACTATGGAG GGGAGGGGAT TGAGTTCAGG TGCCGGGACA TCCGGGAACC GCTCGAGGAC
CTCGGCCTCT TCGACTTCGT CTGGGTGCGC TTCGTGCTCG AGTACTATCG TTCCACCGGT
TTCGAGCTGG TTTCCCACCT TTCCCGAATC GTCAAGCCGG GAGGGGTCCT TTGCCTCATC
GATCTCGATC ACAATTGCCT CTGTCACTAT GGAATCCCTC CAAGGCTCGA GAGAACCCTG
TTCGCTCTCG TCGGAATGTC CGAGCGGGAA GCCGATTTTG ACCCTTACGC CGGCAGGAGA
CTCTATTCAC ATCTCTACCG GCTCGGGTAC CAGGAGATCG ATCTGTTCGT CGAGGCTCAC
CATCTGATTT TCGGCGATCT GGAAGGAAAG GATTCGTACA ACTGGGCGAA GAAGGTGGAA
GTCGCTTCGC GGAAGCTCGG CTTCGATTTC GCCGAATACG GCGGCGGAGT CGAAGAATTC
AAGGCGGAAT TCAAAGATTT CTTTTCCGAT CCGGGACGGT TCACCTATTC TCCCCTGATC
CGCTGCCGGG GTCGCAGGCC GTTGGACGAA AGATAG
 
Protein sequence
MQCIEYLMES EDEATRLEMK TDCRSVEAQA LWAGLGPGMR VADICCGTGK TSACLNALVQ 
PGGTVIGIDG SPERVAYAVD HYGGEGIEFR CRDIREPLED LGLFDFVWVR FVLEYYRSTG
FELVSHLSRI VKPGGVLCLI DLDHNCLCHY GIPPRLERTL FALVGMSERE ADFDPYAGRR
LYSHLYRLGY QEIDLFVEAH HLIFGDLEGK DSYNWAKKVE VASRKLGFDF AEYGGGVEEF
KAEFKDFFSD PGRFTYSPLI RCRGRRPLDE R