Gene Sfum_2743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2743 
Symbol 
ID4458937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3384473 
End bp3386575 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content60% 
IMG OID639703514 
Producthypothetical protein 
Protein accessionYP_846856 
Protein GI116750169 
COG category[P] Inorganic ion transport and metabolism
[S] Function unknown 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component
[COG1865] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACAA TCCGACGATC TCGTAAGCTT GCATTCCTGG GAATCTTTCT GCTGCCGGCC 
CTGTTTGGAG GTGCCGCCCC CTTGGCCGCT CAGCCGGCCG GCTTCGTCGA TTCCGGCGGC
AACCACGTCA CATTGCCGCA ACGGCCCAAA AGGGTCATCT CCCTCGTGCC CGCCCTCACC
GAGATCATAC TCCGACTGGG AGCCGGAGAG TGTCTTCAGG GCATCACGTT TCACGATACC
CGCTTGGCGG AAGCCAACGG GAAGACAATC GTCGGCGGCT TTCTCACCCC ATCCCCGATC
CGCATGATGT CTCTCGATCC GGATCTCGTC CTGGTCTCGT CCATACATCG AACGGTTCAG
GCAGAATTCC GGGGGCATCC GTTCCCCGTG CTCGAGCTGG AGTCCCGTTC CATTTCCGAC
CTCTACCGTA ACATCCGGCT TCTGGGCGAG ATTTTCGACA AGAAGGCGAC GGCCGAGGAG
GTGATCCTCG AGCTGCACGG GAAGCTGCGG CTCGTTGAGC GAAAGATCGA GCGGATTCCC
GGGAACGCGC GCAAAAGAGT CGTCCGGTTC ATGGGGATCA GCCACAACCG CATAACGACC
CCGGGAGACG ATTCCTTCCA GAACGATTTC ATTCGCGCGG CGGGGGGCAT TCCTCCCCGC
CTCGGCAAAC ACGGAAACGT TGTAGAGATG ACCGTGGAAG AGTGGAAACG CTTCAATCCC
CAAGCGGTCT ATGGTTGCGG CGCGGACCGC GAGACCGCCG CGAAATTCCT GTCGCAACCG
GGCTGGAACG AAGTGGAGGC GGTGCGCAAG GGGAAGATCC TCTCCTTCCC GTGCGACTTG
ACGTGCCGTT CCTCGGTTCG ATCGGCCGAC TTCGTCGCAT GGCTTGCTTC AACGGTCTAC
GACGATGCAT TCGCCATGGA GCGCAACCGG GTCCTGCGGG AAAAACGCAT CGGAACCAGG
CCCGTGGAGC TCCCGCTCGA TTATGTTCGA TCCGCGCGAA TAGTGGAAAC CACCATTTTC
GACTTTCCCA ACAAGACGCT CCTCATTGAA TTCATCGAAC CCCAGCGGGT GACGTCGACC
CTCGAGGGTG AACGCAGGGG AATTCGCGCC GTGGGAAACC ACTACTTCCC GCCTCCATGC
TGGAGCGTCG GGCACAGGCT CGGGTTCGAG CAGTGGAAGA ATCACACCCT GCAAGTGATT
GGCAGCCCTC CCGGGACAAG CTGCTTCCTC TTTACCGGTG CGGACATGCA AAACCTTTCC
GTGCAGAAGG CGCAGTTCAA GGACCTTCAG GTTTACGCCC TGGTGACTGC CGGCGTGGAG
AGCAATGCGA TTCGCATGTC CGCCGACGAG GGGCTGTTTT ATGAACCGGG AACCGTCAAC
GTGCTCCTCC TCACCAATAA GAGGCTCACC CCCAGGGCAA TGAGCCGGGC GATCATCACG
GCAACGGAGG CCAAGACGGC GGCGATGCAA GACCTGGACA TCCGGAGCGC CGCCGGACCG
AGGTTTCTGC AGGCGACGGG GACGGGAACG GATGAGGTGC TCGTGGTGGA GGGCAGGGGC
GGGCGCATCG ACAACACGGG GGGCCATTGC AGGATGGGCG AGCTCATTGC GAAGGCCGTA
TATGCGGGAG TCAAGAACGC CGTCGAACGG CAGAACGGAA TAACCAATCA TCGGAACGTC
TTTCGGAGAC TGAGGGAAAG AAACATCGAC CTGCACGGGC TCACCCGGGA ATGCGGCGCC
TGCTCCGACA GGGATGTTTC GGACAACATC CTTGGGCAAA TGGAAAATCT TTTGCTGCAA
CCCCGTTTCG CTTCCTTTCT GGAATCGGTT TTTGCTCTGA GCGATGCCTT TGAGAGAGGT
CAAGTCGAGG ACCCGGGACT CTTCAAGACA TACTGCCTCG GTGTGGCGCA GGAAATTGCC
GGAGACCGCA ACGTTCGGTG GATCGATCGG AAGAGGTCGG AGACCATCCC GCCGGTTGTC
GGGATGGCCC TCGACGCCTT GCTGAACGGA CTGCTCTCAA AGGCGGAACG GGAAGGGGAC
GTTGTTTCAC AGGCCTCGCC GCCCGAACGC CCATCCGGCC CGTACGTGTC CTCGGACCGT
TGA
 
Protein sequence
MRTIRRSRKL AFLGIFLLPA LFGGAAPLAA QPAGFVDSGG NHVTLPQRPK RVISLVPALT 
EIILRLGAGE CLQGITFHDT RLAEANGKTI VGGFLTPSPI RMMSLDPDLV LVSSIHRTVQ
AEFRGHPFPV LELESRSISD LYRNIRLLGE IFDKKATAEE VILELHGKLR LVERKIERIP
GNARKRVVRF MGISHNRITT PGDDSFQNDF IRAAGGIPPR LGKHGNVVEM TVEEWKRFNP
QAVYGCGADR ETAAKFLSQP GWNEVEAVRK GKILSFPCDL TCRSSVRSAD FVAWLASTVY
DDAFAMERNR VLREKRIGTR PVELPLDYVR SARIVETTIF DFPNKTLLIE FIEPQRVTST
LEGERRGIRA VGNHYFPPPC WSVGHRLGFE QWKNHTLQVI GSPPGTSCFL FTGADMQNLS
VQKAQFKDLQ VYALVTAGVE SNAIRMSADE GLFYEPGTVN VLLLTNKRLT PRAMSRAIIT
ATEAKTAAMQ DLDIRSAAGP RFLQATGTGT DEVLVVEGRG GRIDNTGGHC RMGELIAKAV
YAGVKNAVER QNGITNHRNV FRRLRERNID LHGLTRECGA CSDRDVSDNI LGQMENLLLQ
PRFASFLESV FALSDAFERG QVEDPGLFKT YCLGVAQEIA GDRNVRWIDR KRSETIPPVV
GMALDALLNG LLSKAEREGD VVSQASPPER PSGPYVSSDR