| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2678 |
|---|
| Symbol | |
|---|
| ID | 4459012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 3313245 |
|---|
| End bp | 3314201 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639703449 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_846791 |
|---|
| Protein GI | 116750104 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.159389 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCACGGA AGATTCTCTT GGCGGTAGAC GGAACGGAGA AGGGACTGGA ATCGGTTTCG
GTCCTCGGAC GCCTCTTGAA AGACCAGCCG GACCTCGAAC TGGTGCTTTT TCATTGCGTG
CAGCAGTTGT CCAGCCTGCT TCCGAGCGAT CTGTGCGTGG ACCTCGAAGA CCGGTGCAAG
ATTTCCTTCA AGGACCAGGA AAGGATCGGC AACGCGGTAC TGAGCGAATC CGTCAAACGG
CTCGTTCAAG CAGGATTCCC CGAGGACAGG ATCGTGCCGA AGCTGAAAAT GAACAGCATG
GACCCCGCGC AGGACATCAT CGCCGAAGCC GACAGCCGCA AGATCAGGAC CATCGCGCTG
GGACGGCGCG GTCGCAGCCA GGTCGAAGCC CTTCTGCTGG GCAGTGTGTC CGGGAAGGTG
GCGCAGTACG CCCAGCACAA GACGGTCTGG ATCGTCGATG CGCCGGTCAA CGAGACCGGG
AAGGTCCTCA TCGCCATGGA AGACGCTCCG GAGAGTCGCG AGCTCACCGC TTACGCGGCG
GAATTCGTCG CCCCGTCCAG GCGCATGCGG TTCACTTTCC TGCATCTCAT GCCGCCGGTC
CCCCCCACGT TCTGGGACAA CGGCCACATC CTCGGCTCCG CCGAGCGAAA AGACCGGCAG
TCGCGAATCG AAAAGTGGCG CTCCGAATGG ATGGACCGGG TAAGCAAGTT CATGTCCGAC
GGGAAGGAAC TGCTGCAGCG GCAGGGAACG CCCGGGACGA ACCTCGACAC CCTGGTCCTC
CCGACGAAGC TGGGAATCGC GCGGGACCTG CTCAACGAGA TCGCCGAACA CCAGTTTCAG
ATGGTGATCA TGGGCAAGAA GAGCTTTCAT GAACGAAAGC CGTTCCTCAT GGGGAGCCAC
GCGAGCAAGG TCATGCAAAA CGTCAAGTGC GTGGTGCTTT GCCTGGTGGA CTATTAG
|
|---|
| Protein sequence | MARKILLAVD GTEKGLESVS VLGRLLKDQP DLELVLFHCV QQLSSLLPSD LCVDLEDRCK
ISFKDQERIG NAVLSESVKR LVQAGFPEDR IVPKLKMNSM DPAQDIIAEA DSRKIRTIAL
GRRGRSQVEA LLLGSVSGKV AQYAQHKTVW IVDAPVNETG KVLIAMEDAP ESRELTAYAA
EFVAPSRRMR FTFLHLMPPV PPTFWDNGHI LGSAERKDRQ SRIEKWRSEW MDRVSKFMSD
GKELLQRQGT PGTNLDTLVL PTKLGIARDL LNEIAEHQFQ MVIMGKKSFH ERKPFLMGSH
ASKVMQNVKC VVLCLVDY
|
|---|
| |