Gene Sfum_2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2397 
Symbol 
ID4459315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2960066 
End bp2960782 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content58% 
IMG OID639703162 
Producthypothetical protein 
Protein accessionYP_846513 
Protein GI116749826 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGC TGATCGTCGG CGGTCTTTCC GTTCTGTTTT GCAGAACCGA CCTGTTCAAG 
TTTTTCGTCA GCAGGCAGAG CATGGCGAGC TTTTTGGATT CGCTGGGTTC CTGGGGCTTC
CTCGGGTTCA TCTCCCTGCA GGCCCTTCAG GTTGTCGTGG CTCCCATTCC CGGGGAAGTG
ACGGGACTGC TGGGAGGATA TCTGTACGGT CCCCTGGTGG GAATAGTCCT TTCCACCGTG
GGGTTGACCG TCGGCTCGTT CACCGCTTTC GCCCTGTCAC GAGCCCTGGG CCGGCCCTTT
GCGGAAAAGT TCGTGCCCAG GCCCGCAATC AATCGTTTCG ATTACCTGCT CAAGCATCGA
GGGCTTTTCC TGGTTTTTCT GCTCTTCCTC ATCCCGGGAA TTCCCAAGGA CTACCTGTGC
TACATCCTGG GGCTGGGGCA GATCACGACG ACGGAGTTCC TCTTCGTGGG TACGATCGGC
CGGTTTTTCG GGACGATCCT GCTGTCCCTT GGAGGCAACT TTCTGCGGCT CGAGCAGTAT
TCGCGTTTTT CAATCCTGGT GGCGGCGGCC CTTTTGGCGA TACTTGCCGC GATGCTGTGC
AAGGATAAGC TCGAACGCCT GTTTGCGCTT CTGCATGCCA AAGCCATGCA CGCCAAAGCC
ATTCAGGCGA AAGCCATGCA AGCCAAGGCT CCGCAAGTCC ACGGCGCCAA CAAGTAA
 
Protein sequence
MLLLIVGGLS VLFCRTDLFK FFVSRQSMAS FLDSLGSWGF LGFISLQALQ VVVAPIPGEV 
TGLLGGYLYG PLVGIVLSTV GLTVGSFTAF ALSRALGRPF AEKFVPRPAI NRFDYLLKHR
GLFLVFLLFL IPGIPKDYLC YILGLGQITT TEFLFVGTIG RFFGTILLSL GGNFLRLEQY
SRFSILVAAA LLAILAAMLC KDKLERLFAL LHAKAMHAKA IQAKAMQAKA PQVHGANK