Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2026 |
Symbol | |
ID | 4459657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2479891 |
End bp | 2482584 |
Gene Length | 2694 bp |
Protein Length | 897 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639702792 |
Product | hypothetical protein |
Protein accession | YP_846144 |
Protein GI | 116749457 |
COG category | [S] Function unknown |
COG ID | [COG4694] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.657836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCCGA TCAAAAAGAT TCTCTCTTTT GCACAAAACC GTGATCCCTG GCAACAGGAT CTTATTCGAA GAATCTATAC AAAGAGTGAG CTTAGGAAGG AGGATACGGA TCAGGCCCTC CAATTGTTGA AAGTTTGCTA CGGTATTCTT CCTTCCGAGC AGGCGCCATG TCCTGAATGT CTCACTGAAT CCCATACTGC ACCAGAATCG CCGCAAGTAC CCAAGGTGAC CTTATACTCT CTCGGGGAAG TTAAGTTCGT TAATCGCTTA GCGGAAAACC AGACGCTCCA GTTCGCAGTT GACGGAATTA CTGTCGTCTA TGGTGATAAT GGGAGCAGGA AGAGTGGGTA CTGTCGGTTA CTCAAAAAGC TCTGCCGCGT CCGGTCAGGC GGAGAAGAAC AGATCTTCGG GAATGCCTTC AAGTCGGAAC AAACCCCGCC CGCTGAAGTA ACGGTACGCT TTTCGGCAGG AACCGATGCC CCAAAGAAGG TCCGGTGGCT CGATGGAGAA GAACCACCAC CGGAACTGGG CCGGTTCTCT GTCTTTGATA CCAGGACAGT TCCGATCTAT GCCGACAAAG AAAACAAATT AGAGTTTCTG CCGCACAGTA TGGATATTTT ACCGAAACTC GGGGCGTTGT GTCAGTCACT TGCCGGAAGC GTTGATACAG AGATTAGAGC ACTCGAAGTC CAACTTGCCA CCCCTTTGCC TCAATTCGCG CCTCGCACCA AGATTGCAGA GATAGTTGCC AAGCTTGTTT CTGCGACACC CACTAAAGCA TTGCCCACTG TTACCCAGTT GAGAGAGTTG GCCCAGTGGG ACCAGGAATC CGAGCAGGAA CTCAATAGGA TTGAACGCAC GCTAAAAACA GATGCACAGG CCCTCGCCGC CCGGTGTCGT CAACTAAAAG CGGGGGTTGA GCAGCTGAAA ACTGACCTAA GCAATGCCGG AGCAGTAGTA GGGGATGATG CCCTTCGAAA ACTTATCGCG AATGTTAAGA CTACCAAGAC AGCTCGGGCG GCAGCTGCTT TAACGGCAAA AACAGCCTTT CAAAACGAGC CGCTGTCCGG TGTTGGTACA GAACCCTGGC GGCTCATGTT TGGGTATGCC CGGAAATATA GTGAAATTGC CTATCCCGGG TTGTCTTTTC CGGTCACTGG TGCCGGTAAG GTCTGCGTCT TATGTCAGCA ACCTCTCACA CCGGACGCCT CTCATCGTCT TAAACGATTT GAAGCCTTCA TAAAGGATAC TGCTGAAGCG CAAGCCAAAA AGCTGGAGCA ATCTCTGACT AAGGAGATAG CGACCTTTAG TCGGTTTACA CTTCGGCCCC GTAATGAGAT CGAAACGTTT TTGCTCGGCA TGGAGACTAT TGATCCCGCC AGCAACGCGC TGGAAGAAGA GATTGTGGAG TTCTTCAAAG CGGTAGCCAC TCGCCAAACT GCCTTCGTGA AATCCTGGCA GGAACTAGTG GGGCTTGAAG CACTGCCCGT GCTGCCGCCT TCACCCGCAC CAAAGCTTTC CTCTGCGATA GAGCGACTTA ATAAATTGCT ACGCGGATAT GAGCAATCAC AAAACCCTGA GCAACGCGCA ATTTTGGAGC AGCGCAAGGA AGACCTTTTG GCTGGCAAGC AACTGTCAGA AAATATTAGG ATTATTTTGA TTCGCCTCCG GCAACTTACA ACCCTATCTA AGCTCAAGCA GTGCAAAGCT GCCTGCGACA CTACGGCAAT TTCCAAAAAG AATTCAGAGT TACGTAGGCT CTTTATTACG CAGGAGTTTG AGGAACGCCT AAGCAAGGAA GTTAAAGAGT TTCGTCTTGA GCACCTACCC TTTAAGATTC ACGAAAGAAG TGATCGAGGA GTTAGTTTTC TCGGCGTTGA CCTCGATATC GTTCAGCGAC TGCAAAACAA GGATATTCTC AGTGATGGAG AATTCAGGGC GCTGGCCCTC GCCTGTTTTC TCACCGAGGT GAACACGATT CCTCATCACA GCGGGATTAT CCTCGATGAT CCGGTTTCCT CATTGGACCA TGTCCGGACT CGTCGGGTAG CGATGCGATT GGTGCAGGAG GCTAAAAGAG GCGGCCAGGT AATCATATTT ACCCATGACC TCGTATTTTA CTATGAACTT TGGATGGCAG CTGCGGAAGC CCAAGTGCCC CTAACCCGCC ATTGGATTCG GGCTACCAGT GAACATGGAT TTGGAACTAT CCTCAACAAA GAGGAGCCTT GGCAAGCAAA AAAGGTAAAC GCTCGCCTTC AATATTTAGA GGAGAAGAAA TTACCGCTTA TCCGGAATAT TCAAGATACC TCGGGAGACC AGTATCGAAG AGCTGTGATG GATTTTTATA GTAGCTTGCG GGAAACATGG GAGCGCCTGG TGGAAGAGCT CCTTTTCAAC GGGGTGGTGA CTCGGTTCCA AACAGGAGTG ATGACGCAGT CTTTGAAGGG GGCTCAGGTA GAGGATGAAG ATTATCGACG GATCTATTTT GCGATGAAGA GAGCCTCTGA ATTTTCAGGA CACGACAGAA CCAGAGCCAG GCAGGTTTCT TTCCCCGGTC CCGATGAGAT CAAGAGAGAT CTGGAAGATC TGAGGATTTA CGCAAAGGGG CTTAAGGCCA GAAATAAGTC TCTGGAAGAA TCAAGAATTA CCCTGGAGAA GCCACCAGAA GGGCTTCTTG TACAGAGAGG CTAA
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Protein sequence | MSPIKKILSF AQNRDPWQQD LIRRIYTKSE LRKEDTDQAL QLLKVCYGIL PSEQAPCPEC LTESHTAPES PQVPKVTLYS LGEVKFVNRL AENQTLQFAV DGITVVYGDN GSRKSGYCRL LKKLCRVRSG GEEQIFGNAF KSEQTPPAEV TVRFSAGTDA PKKVRWLDGE EPPPELGRFS VFDTRTVPIY ADKENKLEFL PHSMDILPKL GALCQSLAGS VDTEIRALEV QLATPLPQFA PRTKIAEIVA KLVSATPTKA LPTVTQLREL AQWDQESEQE LNRIERTLKT DAQALAARCR QLKAGVEQLK TDLSNAGAVV GDDALRKLIA NVKTTKTARA AAALTAKTAF QNEPLSGVGT EPWRLMFGYA RKYSEIAYPG LSFPVTGAGK VCVLCQQPLT PDASHRLKRF EAFIKDTAEA QAKKLEQSLT KEIATFSRFT LRPRNEIETF LLGMETIDPA SNALEEEIVE FFKAVATRQT AFVKSWQELV GLEALPVLPP SPAPKLSSAI ERLNKLLRGY EQSQNPEQRA ILEQRKEDLL AGKQLSENIR IILIRLRQLT TLSKLKQCKA ACDTTAISKK NSELRRLFIT QEFEERLSKE VKEFRLEHLP FKIHERSDRG VSFLGVDLDI VQRLQNKDIL SDGEFRALAL ACFLTEVNTI PHHSGIILDD PVSSLDHVRT RRVAMRLVQE AKRGGQVIIF THDLVFYYEL WMAAAEAQVP LTRHWIRATS EHGFGTILNK EEPWQAKKVN ARLQYLEEKK LPLIRNIQDT SGDQYRRAVM DFYSSLRETW ERLVEELLFN GVVTRFQTGV MTQSLKGAQV EDEDYRRIYF AMKRASEFSG HDRTRARQVS FPGPDEIKRD LEDLRIYAKG LKARNKSLEE SRITLEKPPE GLLVQRG
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