Gene Sfum_2026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2026 
Symbol 
ID4459657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2479891 
End bp2482584 
Gene Length2694 bp 
Protein Length897 aa 
Translation table11 
GC content50% 
IMG OID639702792 
Producthypothetical protein 
Protein accessionYP_846144 
Protein GI116749457 
COG category[S] Function unknown 
COG ID[COG4694] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.657836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCCGA TCAAAAAGAT TCTCTCTTTT GCACAAAACC GTGATCCCTG GCAACAGGAT 
CTTATTCGAA GAATCTATAC AAAGAGTGAG CTTAGGAAGG AGGATACGGA TCAGGCCCTC
CAATTGTTGA AAGTTTGCTA CGGTATTCTT CCTTCCGAGC AGGCGCCATG TCCTGAATGT
CTCACTGAAT CCCATACTGC ACCAGAATCG CCGCAAGTAC CCAAGGTGAC CTTATACTCT
CTCGGGGAAG TTAAGTTCGT TAATCGCTTA GCGGAAAACC AGACGCTCCA GTTCGCAGTT
GACGGAATTA CTGTCGTCTA TGGTGATAAT GGGAGCAGGA AGAGTGGGTA CTGTCGGTTA
CTCAAAAAGC TCTGCCGCGT CCGGTCAGGC GGAGAAGAAC AGATCTTCGG GAATGCCTTC
AAGTCGGAAC AAACCCCGCC CGCTGAAGTA ACGGTACGCT TTTCGGCAGG AACCGATGCC
CCAAAGAAGG TCCGGTGGCT CGATGGAGAA GAACCACCAC CGGAACTGGG CCGGTTCTCT
GTCTTTGATA CCAGGACAGT TCCGATCTAT GCCGACAAAG AAAACAAATT AGAGTTTCTG
CCGCACAGTA TGGATATTTT ACCGAAACTC GGGGCGTTGT GTCAGTCACT TGCCGGAAGC
GTTGATACAG AGATTAGAGC ACTCGAAGTC CAACTTGCCA CCCCTTTGCC TCAATTCGCG
CCTCGCACCA AGATTGCAGA GATAGTTGCC AAGCTTGTTT CTGCGACACC CACTAAAGCA
TTGCCCACTG TTACCCAGTT GAGAGAGTTG GCCCAGTGGG ACCAGGAATC CGAGCAGGAA
CTCAATAGGA TTGAACGCAC GCTAAAAACA GATGCACAGG CCCTCGCCGC CCGGTGTCGT
CAACTAAAAG CGGGGGTTGA GCAGCTGAAA ACTGACCTAA GCAATGCCGG AGCAGTAGTA
GGGGATGATG CCCTTCGAAA ACTTATCGCG AATGTTAAGA CTACCAAGAC AGCTCGGGCG
GCAGCTGCTT TAACGGCAAA AACAGCCTTT CAAAACGAGC CGCTGTCCGG TGTTGGTACA
GAACCCTGGC GGCTCATGTT TGGGTATGCC CGGAAATATA GTGAAATTGC CTATCCCGGG
TTGTCTTTTC CGGTCACTGG TGCCGGTAAG GTCTGCGTCT TATGTCAGCA ACCTCTCACA
CCGGACGCCT CTCATCGTCT TAAACGATTT GAAGCCTTCA TAAAGGATAC TGCTGAAGCG
CAAGCCAAAA AGCTGGAGCA ATCTCTGACT AAGGAGATAG CGACCTTTAG TCGGTTTACA
CTTCGGCCCC GTAATGAGAT CGAAACGTTT TTGCTCGGCA TGGAGACTAT TGATCCCGCC
AGCAACGCGC TGGAAGAAGA GATTGTGGAG TTCTTCAAAG CGGTAGCCAC TCGCCAAACT
GCCTTCGTGA AATCCTGGCA GGAACTAGTG GGGCTTGAAG CACTGCCCGT GCTGCCGCCT
TCACCCGCAC CAAAGCTTTC CTCTGCGATA GAGCGACTTA ATAAATTGCT ACGCGGATAT
GAGCAATCAC AAAACCCTGA GCAACGCGCA ATTTTGGAGC AGCGCAAGGA AGACCTTTTG
GCTGGCAAGC AACTGTCAGA AAATATTAGG ATTATTTTGA TTCGCCTCCG GCAACTTACA
ACCCTATCTA AGCTCAAGCA GTGCAAAGCT GCCTGCGACA CTACGGCAAT TTCCAAAAAG
AATTCAGAGT TACGTAGGCT CTTTATTACG CAGGAGTTTG AGGAACGCCT AAGCAAGGAA
GTTAAAGAGT TTCGTCTTGA GCACCTACCC TTTAAGATTC ACGAAAGAAG TGATCGAGGA
GTTAGTTTTC TCGGCGTTGA CCTCGATATC GTTCAGCGAC TGCAAAACAA GGATATTCTC
AGTGATGGAG AATTCAGGGC GCTGGCCCTC GCCTGTTTTC TCACCGAGGT GAACACGATT
CCTCATCACA GCGGGATTAT CCTCGATGAT CCGGTTTCCT CATTGGACCA TGTCCGGACT
CGTCGGGTAG CGATGCGATT GGTGCAGGAG GCTAAAAGAG GCGGCCAGGT AATCATATTT
ACCCATGACC TCGTATTTTA CTATGAACTT TGGATGGCAG CTGCGGAAGC CCAAGTGCCC
CTAACCCGCC ATTGGATTCG GGCTACCAGT GAACATGGAT TTGGAACTAT CCTCAACAAA
GAGGAGCCTT GGCAAGCAAA AAAGGTAAAC GCTCGCCTTC AATATTTAGA GGAGAAGAAA
TTACCGCTTA TCCGGAATAT TCAAGATACC TCGGGAGACC AGTATCGAAG AGCTGTGATG
GATTTTTATA GTAGCTTGCG GGAAACATGG GAGCGCCTGG TGGAAGAGCT CCTTTTCAAC
GGGGTGGTGA CTCGGTTCCA AACAGGAGTG ATGACGCAGT CTTTGAAGGG GGCTCAGGTA
GAGGATGAAG ATTATCGACG GATCTATTTT GCGATGAAGA GAGCCTCTGA ATTTTCAGGA
CACGACAGAA CCAGAGCCAG GCAGGTTTCT TTCCCCGGTC CCGATGAGAT CAAGAGAGAT
CTGGAAGATC TGAGGATTTA CGCAAAGGGG CTTAAGGCCA GAAATAAGTC TCTGGAAGAA
TCAAGAATTA CCCTGGAGAA GCCACCAGAA GGGCTTCTTG TACAGAGAGG CTAA
 
Protein sequence
MSPIKKILSF AQNRDPWQQD LIRRIYTKSE LRKEDTDQAL QLLKVCYGIL PSEQAPCPEC 
LTESHTAPES PQVPKVTLYS LGEVKFVNRL AENQTLQFAV DGITVVYGDN GSRKSGYCRL
LKKLCRVRSG GEEQIFGNAF KSEQTPPAEV TVRFSAGTDA PKKVRWLDGE EPPPELGRFS
VFDTRTVPIY ADKENKLEFL PHSMDILPKL GALCQSLAGS VDTEIRALEV QLATPLPQFA
PRTKIAEIVA KLVSATPTKA LPTVTQLREL AQWDQESEQE LNRIERTLKT DAQALAARCR
QLKAGVEQLK TDLSNAGAVV GDDALRKLIA NVKTTKTARA AAALTAKTAF QNEPLSGVGT
EPWRLMFGYA RKYSEIAYPG LSFPVTGAGK VCVLCQQPLT PDASHRLKRF EAFIKDTAEA
QAKKLEQSLT KEIATFSRFT LRPRNEIETF LLGMETIDPA SNALEEEIVE FFKAVATRQT
AFVKSWQELV GLEALPVLPP SPAPKLSSAI ERLNKLLRGY EQSQNPEQRA ILEQRKEDLL
AGKQLSENIR IILIRLRQLT TLSKLKQCKA ACDTTAISKK NSELRRLFIT QEFEERLSKE
VKEFRLEHLP FKIHERSDRG VSFLGVDLDI VQRLQNKDIL SDGEFRALAL ACFLTEVNTI
PHHSGIILDD PVSSLDHVRT RRVAMRLVQE AKRGGQVIIF THDLVFYYEL WMAAAEAQVP
LTRHWIRATS EHGFGTILNK EEPWQAKKVN ARLQYLEEKK LPLIRNIQDT SGDQYRRAVM
DFYSSLRETW ERLVEELLFN GVVTRFQTGV MTQSLKGAQV EDEDYRRIYF AMKRASEFSG
HDRTRARQVS FPGPDEIKRD LEDLRIYAKG LKARNKSLEE SRITLEKPPE GLLVQRG