Gene Sfum_1866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1866 
Symbol 
ID4459807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2282818 
End bp2283552 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content60% 
IMG OID639702633 
Productputative phage repressor 
Protein accessionYP_845986 
Protein GI116749299 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACGG TCAAAAGCCA ATTAAAATCC AAAAAAAATA CCGAAATGGC GGTGAGGCTC 
AAAAAAATAA TCCAGAATTC TGGTTTATCC CTCGCCGAGT TTGCCCGACG CACGCAGGTG
TCCAAGAACA CGCTGGTCAA TTACCGGGAT GAGGCGACTT CTCCCACCGG AACTTTCCTG
GAGAAGGTGT GCCGCAATTT CTCGGTCAGC GCGTCCTGGC TCCTGCTTGG GGACGGAGGT
CCGTACGACG TTTCGGGAGG CGGAAAGCGC GCCGTGGAAT ACACCCTCAT CCCGCTGCTC
AAGTCCCGGG TGTCCACGGG ACCCGACGGA GAAATTCTGT TCGGAGACAT TGAGGACCAC
TATCCATTCA AGCTCTGGTG GTTGGAGAAG CTGGTGGGGG AGGGAGAGCG GAGACAGAAA
GGGCTTTTCC TGATCCGGGT GCAGGGGGAC GCCATGCTTC CGACGGTCAA TCAGGGGGAT
GTGGCGCTGG TGGACAGCGA CGAGGCGGAG CGAATGCGGG TGCTCTCCGG TCGCATCTAC
CTGGTGGTTC TGCCGGACGG CGCCACGGCC TTCAGGCGAC TGGCGCTGAG CGGGGGCCGG
GATTGTCCGC GGCTGGTCTG CCTCTCGGAC AACACGGCGG CCTTTCGCCC CTTCGAGTTT
GCGCTCGACC CGGGCAAGCC GCTCAGGAAT CACATACTGG GCCGCATACG GTGGGTCGGC
AGGGAGTTTG AATAG
 
Protein sequence
MSTVKSQLKS KKNTEMAVRL KKIIQNSGLS LAEFARRTQV SKNTLVNYRD EATSPTGTFL 
EKVCRNFSVS ASWLLLGDGG PYDVSGGGKR AVEYTLIPLL KSRVSTGPDG EILFGDIEDH
YPFKLWWLEK LVGEGERRQK GLFLIRVQGD AMLPTVNQGD VALVDSDEAE RMRVLSGRIY
LVVLPDGATA FRRLALSGGR DCPRLVCLSD NTAAFRPFEF ALDPGKPLRN HILGRIRWVG
REFE