| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1813 |
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| Symbol | |
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| ID | 4459892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2213527 |
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| End bp | 2214585 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639702580 |
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| Product | nifR3 family TIM-barrel protein |
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| Protein accession | YP_845933 |
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| Protein GI | 116749246 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.675437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.130606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAG ACACGGCGCA TTTCCGTCCG AAACCTTTGC GGATCGGAAA ACTGCTTCTT
GACCTGCCCC TGGTCCTTGC GCCCATGGCG GGGGTGACCG ACAGCGCGTA CCGGGCGCTC
ATGGCTGATT TCGGGGCCGC GATGGTGACC ACCGAGATGG TGAGCATCCA GGGCCTCGTG
CGGAATCAGC GGGCAACCCT GGATCTCTGT CGTCAGCAGC ATCCCGTCGG CGTTCCTCTT
GCGGTCCAGG TATTCGGCAG GGACCCCGCG GTCATGGCGG AGGCCGCCCG GCTTGTGGAA
CAAGGCGGCG CGGCGCTGAT CGACATCAAT GCGGGATGCC CGGTCAGAAA AGTCGTGCGG
CAGGGGGCGG GAGCGATTCT GTTGAAGGAT CCCGACCGGC TGGCCGCGAT GGTGGAGGCG
GTGAAAAGGG CCGTGAGCGT TCCGGTGACC GTGAAAATAC GGGTGGGCTG GGACAATGCG
GCCAATGGGG TCGCCGGTCT CGCCCGGCAA CTGGTTTCGG CCGGGGTCGA CGCCATCACC
GTGCATGGCC GCACGGCGGC GCAAATGTAC AGCGGCCGCG CCGACTGGTC GAGGATAGCC
GAAGTCAAGG CCGCCGTCGC CGTTCCCGTC ATTGGCAACG GCGATGTGAC GAGCCCGGAA
CTGGCCGAAA GAATGATCCA TGAAACGGGA TGCGACGGCG TCATGATCGG CCGGGCCAGC
CTGGGTAACC CCTGGCTGTT CGCGGTCATC TCCCGCCGCT GGGGGCGTGG GGCACGGCAA
GGCGACTGCC CCGGGTGGAA CGACTTTCTG CGGACGGCCG AGGCTCACCT GGAATCGTTC
CGGACCATGC GGCCCCGTGC CGACGGACAT CTGAAGAAGC TTCTCATCTG GTATTCCAAG
GGCTGCCCGG ATTCGGCCGG CCTGCGCTGT CGTATCGCCG GTCCCGACGG AATTGAGAGC
ATGCTGGCGG CGTTTCGCTC CTGGGTGCAC GAGCTGATGG CCAGGGGGGT TCCCTTCCTG
CCGTTCAAAG TCCCGGAAGC GGGGCCGACG AGGAACTGA
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| Protein sequence | MTQDTAHFRP KPLRIGKLLL DLPLVLAPMA GVTDSAYRAL MADFGAAMVT TEMVSIQGLV
RNQRATLDLC RQQHPVGVPL AVQVFGRDPA VMAEAARLVE QGGAALIDIN AGCPVRKVVR
QGAGAILLKD PDRLAAMVEA VKRAVSVPVT VKIRVGWDNA ANGVAGLARQ LVSAGVDAIT
VHGRTAAQMY SGRADWSRIA EVKAAVAVPV IGNGDVTSPE LAERMIHETG CDGVMIGRAS
LGNPWLFAVI SRRWGRGARQ GDCPGWNDFL RTAEAHLESF RTMRPRADGH LKKLLIWYSK
GCPDSAGLRC RIAGPDGIES MLAAFRSWVH ELMARGVPFL PFKVPEAGPT RN
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