| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1710 |
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| Symbol | |
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| ID | 4459997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2090169 |
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| End bp | 2090945 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639702479 |
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| Product | ComL family lipoprotein |
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| Protein accession | YP_845832 |
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| Protein GI | 116749145 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00105287 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.877489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGATCG GCCTGGAGAA GATACGGAAG GTCTACCGAT TTGCTGCATT CGTTCCACTC
CTGTCGCTTG TGCTGGTCAC CGGTGGCTGC GGCACATTCC TCGGGGAGTT TTACTTCGGG
GATCTCCTCG GCGGGAAGAA GAGCTCGAGC ACGGTGGACA AGACCGCCGA GCAGCTTGCA
GTGGAAGGCA TGCAGAAAAT GCAGAAAAAG GATTACGACG ATGCCCTCAA GGCTTTTCGA
AAGCTGAAAG AGCATTATCC TTACAGCAAG TACGCGATCC TGGCGGAGCT CAAAATCGGG
GATGCCCTTT TCCACGATAA GAAGTACAGC GAGGCGGCGA TAGCCTACGA GGAGTTTGCC
CGCTTGCACC CCAGGAATGA AGTCGTGCCT TATGTCCTCT ACCAGATCGG AATGAGCCAC
TTCCTGACGT TCACGACGAC GGACCGCGAT CCGGAAGAGA CTCAGGCCGC AATAGAGGCT
TTTCAGCGGG TGGTCCAGAT GTTTCCGCAG TCCGATTACG CCAGGCGCGC TCAGAAACAG
CTCTTCGAGT GCCAGAAGCG GGCGGCGGCC CATGAATTCA ACGTGGCGTC CCTGTATTAC
CGCATGGGTG AGTACTTCGC CACCCGGGCC AGGCTGCGGA CAATCAACGA AAAGTACTCC
ACGGCGGCGA AGGAGTTGGG ACTCCAGAAA GACATCGATA AGATGCTTGC CAAGAGCGAG
CGGGAGTGCG CTAAGGGAGA AAAGAAGCCA AGCGTCTGGA CACGGTTGGG CTTTTAG
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| Protein sequence | MRIGLEKIRK VYRFAAFVPL LSLVLVTGGC GTFLGEFYFG DLLGGKKSSS TVDKTAEQLA
VEGMQKMQKK DYDDALKAFR KLKEHYPYSK YAILAELKIG DALFHDKKYS EAAIAYEEFA
RLHPRNEVVP YVLYQIGMSH FLTFTTTDRD PEETQAAIEA FQRVVQMFPQ SDYARRAQKQ
LFECQKRAAA HEFNVASLYY RMGEYFATRA RLRTINEKYS TAAKELGLQK DIDKMLAKSE
RECAKGEKKP SVWTRLGF
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