Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1618 |
Symbol | |
ID | 4460087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1975402 |
End bp | 1978803 |
Gene Length | 3402 bp |
Protein Length | 1133 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639702387 |
Product | FG-GAP repeat-containing protein |
Protein accession | YP_845740 |
Protein GI | 116749053 |
COG category | [R] General function prediction only |
COG ID | [COG0457] FOG: TPR repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCAAT CATCAGATCG AACTTGCCTC CACTGCAAAC AAGCGATTCG GATTCTGACC CTGACTGCCT TCTTTACGTT CTCCGCGGCC GCATTCTGCT CGACTCCCGC TTCAAGTCCG GCCGGCGGGC TTGATTCCGC CGCCGTTGCC GTCCACAACA GGGGGGTGGG CCTGATGGGG CAGTTCGACT ATGAGGCCGC TCGGCGCGAA TTCAGCGCCC TGGCTCAGCA GCACCCCGAC AACGATGACA TCCAGGTCAA CCTGGCCATC GCCACCTTCA ACCGTCAGAC AAAGGGTGAC GAAGACCTGG CCTTGTCCAT TCTTGCCGGG GTTTTCAAGC ACAATCCCGA GCACCTGCGC GCCCTGTACT GCACCGGCCT TTTGGAACTG CGGGTGGGGC GGCCCGCGGA AGCGGCGGAA TATTTTAGAA AGGTGATTGC CCTCGATCCC CGCGACGCGG AAGCGGCTTA CTTTCTGGGC CAATGCCTCA TGCAACTTTC CCGCTATGAA GAAGCCCTCG GTTGGTTCAG GAAATCGATC GAAGGGGACC AGCTCCTTCG AAGCGCATAC TACAATGTAT TCATGGCCCT CCAGCGCCTC AACAGAAGAG ACGAAGCGGC CGCGACGCTC AAGGATTTCA ATCGCCTCAA AGAAGACCCT CGGGCGCGCC TGCTTGAATT CAAGTACAGG AACATGGGGC GGAAAGCCGA AGTGACGGCC GTGGGGGTCG ATGCCGTCCA GCCGGTTCCC AAGCCTGCCG GGCCGGTTTT TGGCGCTGCG ATCCCCCTGG GGAAAGCCCT CGAGTCGGTC GCCTGGACCG ACGCAGGCCA GGTGAGCTTC ATCCCCGTGC ACATGAGCGT GGTCGACCTG AACGGTGACG GTCATCCGGA TATTTTCATC GCAGGAGCGA TCCAAACTTC GGACGGAACG GTCAACGCGA TTCTGGTGAG CGGGAGCGAC GGTGCCGAAT ACACGCTCCG GATGGATCAC CCGCTGTCAA GGCTCCGGAA CGTCAACGCC GCCCTCTGGG GCGATTATGA CAACGATGGC CTGACCGACG TCTATTTTTG CAGGCAGGGT CCGAACCAGC TGTGGCGGCA GGTTTCCAGG GATCAGTGGC GGGACGTCAC CGATGAAACA GGCACGGCGG GCGGGTCTCT GAACACGGTG GACGGCGCAT TTTTTGATGC GGACCATGAC GGCGATCTCG ATTTTTTCCT CGTCAATGCC GACGGGCCAA ACGAGTTTCT CAACAACAAC CGCGACGGCA CGTTTCGTCC TCTGGCGGCG GAGCGGGGCC TTGGGGGAAG CGGCAGCCAC AGGTCCGTCG TCGTGGCCGA CCTGGACGGC GACCGCGATC TGGACTTGAT CGTGATCAAC CGGAAGCCGC CTCACGAAGT CTACGTGAAC GATCTCTTCT GGGAATACCA CAAGGCGCAG GGCTGGGAAG CGTTCCAGGC TGCCGACGTG CAGGCGGCTG TGGCCGCTGA CGTCGATTCC GACGGTCGGA CGGAGGTCTA TTCCATAGAT TCAGCGGGAA CAATCACGCG CTGGCAACGA GAGCCCGACA ACACCTGGGG CGGAACTCCC CTGAACAGGG GCCTGGAGAC CGAAGCATTC CGGGTGACGG GTTCAGTTCG CATGGCCGTG GCGGACCTGG ACGGCGACGG TATCCTCGAT TTGGTCGTCT CGCATTCCTC GGGGTGGTGG GCGGCATCCA TGGGGTCGAA AGGGCTCACA CCTCTTTTCG AACACCGGGG CGGCGAGGGG GCCGGCCTCG ATGCCTGGAC CCTGCTTTCG TCCGTCAACG GTCCGCACCT GGTTGCGTGG TCTCGAGGCC GTCCTCCGTA TGAGTGGCCT CCGGGTGCCG GGCGTTATCC CTTCGTGACC CTGGCGTTGT CGGGGATGGA AGAGAAAGGT GCGTCTCTTC GGTCCAACTC ATCGGGCATC GGTGCAAGGA TAGCGGTGCG CACAGGTTCG CGCTGGATTG TGCTCAATAC CCTTCGAAAC GATTCGGGGC CGGGGCAGAG CCTCCAGCCC TTGCCGGCAG GGCTCGCGGG AGCGGGGAAA ATCGATTTCG CGGCTATTGA CTGGCCCGAC GGAGTCTATC AGACCGAACT CGACCTGCAG GCCGGAATGT TCCACCGGAT AACGGAAACC CAGCGTCAGC TTTCGAGCTG CCCGGTGCTG TTTGCCTGGG ACGGAACGGC ATTCCGGTTC GTCACCGATC TCCTGGGCGT GGGCGGTCTG GGGTATGCTC TGGGACCGCG GAAGTACGCC GAACCCCGCC CTTGGGAACA CCTCATGCTG CCGGGCGGAA TTCTCAAGCC CGACGAGGGG CGGCTCATCT TCAAGCTCAC CGAACCCATG GAGGAAATCA CCTACCTGGA CGCAGTGTCC CTGGCGGCCT ACGACCTTCC TCCAGGCTGG TCCTTGACGC TTGACGAACG TATGGCCACC GGGGAGCCCG AACCGGACGG CAGCCCGGTC TTCTATCGGT CGTTCGTACT TCCCGCCAAG GCGGAAAACG GCCTGCACCA GGACGTGACC GCGGCAGTAT CGACAAGGGA TCTGACGGCG GCTCCCCCGG GGGAGATAGA CCGGCGTTTC ATAGGCAGGC TCGAACAAGA TCATGTTTTG ACGCTCACTT TCTCCGAGCC GTTGGATTCC CGTGCGGGCC GGCCGGTTCT CATCGCGGAC GGCTGGGTGG AATATCCGTA TTCCCAGACC AATTTCGCCG CCTGGCAGGC GGGGGCCGAC TACCGTGCGC CCACGATCGA GGCTCGAGGG GCCGATGGGC ATTGGCACAG GATCCTTGAC CGATTCGGCT ATCCCGCCGG GATGCCTCGC CAGATGTCCG TGCCGCTGCC GGGTCTTCCC GAGGCGACCA GGGAGTTGCG CATCGTTACG AATCAGGAAA TCTATTGGGA CCGGCTCGGC ATCGCCTTCG CAGAAGACTG CCCCTTGGTC GCGCGCCGTG AATTGCCGCT GGTTGCCGCG CGTCTCGACG AGATCGGATT CCCCGCGCGA ACCGACGGGC CCCAGCGTCT CCCCGGCTAC AACTACGAAC GGCGGCGCCC CAGGTGGGAT ACGCACTTCA TGGAAGGCTA CTACACGAGG ATCGGTCCGG TGGAGGAACT GTTGAAAGCC CGCGACGACG CGCTGGTTGT CTTTGGCCCG GGTGACGGGG TCACGCTCGA GTTCGGCGAG GGTCTCGGAC CGCCGGAGAC GGGCTGGACG AGAGTCTATG TGCTTGAGGC TCACGGGTGG TGCAAAGACA TGGATCTTTA CACCGGTAAC GGCGACACGG TCGAGCCGAT GCCGCATTCG GGCGGAAAAA GCGCCGACAG GGACATCCTG CATGAGACAT ACAACACGAG GTATCAGTCC GGGAGGGAGT GA
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Protein sequence | MRQSSDRTCL HCKQAIRILT LTAFFTFSAA AFCSTPASSP AGGLDSAAVA VHNRGVGLMG QFDYEAARRE FSALAQQHPD NDDIQVNLAI ATFNRQTKGD EDLALSILAG VFKHNPEHLR ALYCTGLLEL RVGRPAEAAE YFRKVIALDP RDAEAAYFLG QCLMQLSRYE EALGWFRKSI EGDQLLRSAY YNVFMALQRL NRRDEAAATL KDFNRLKEDP RARLLEFKYR NMGRKAEVTA VGVDAVQPVP KPAGPVFGAA IPLGKALESV AWTDAGQVSF IPVHMSVVDL NGDGHPDIFI AGAIQTSDGT VNAILVSGSD GAEYTLRMDH PLSRLRNVNA ALWGDYDNDG LTDVYFCRQG PNQLWRQVSR DQWRDVTDET GTAGGSLNTV DGAFFDADHD GDLDFFLVNA DGPNEFLNNN RDGTFRPLAA ERGLGGSGSH RSVVVADLDG DRDLDLIVIN RKPPHEVYVN DLFWEYHKAQ GWEAFQAADV QAAVAADVDS DGRTEVYSID SAGTITRWQR EPDNTWGGTP LNRGLETEAF RVTGSVRMAV ADLDGDGILD LVVSHSSGWW AASMGSKGLT PLFEHRGGEG AGLDAWTLLS SVNGPHLVAW SRGRPPYEWP PGAGRYPFVT LALSGMEEKG ASLRSNSSGI GARIAVRTGS RWIVLNTLRN DSGPGQSLQP LPAGLAGAGK IDFAAIDWPD GVYQTELDLQ AGMFHRITET QRQLSSCPVL FAWDGTAFRF VTDLLGVGGL GYALGPRKYA EPRPWEHLML PGGILKPDEG RLIFKLTEPM EEITYLDAVS LAAYDLPPGW SLTLDERMAT GEPEPDGSPV FYRSFVLPAK AENGLHQDVT AAVSTRDLTA APPGEIDRRF IGRLEQDHVL TLTFSEPLDS RAGRPVLIAD GWVEYPYSQT NFAAWQAGAD YRAPTIEARG ADGHWHRILD RFGYPAGMPR QMSVPLPGLP EATRELRIVT NQEIYWDRLG IAFAEDCPLV ARRELPLVAA RLDEIGFPAR TDGPQRLPGY NYERRRPRWD THFMEGYYTR IGPVEELLKA RDDALVVFGP GDGVTLEFGE GLGPPETGWT RVYVLEAHGW CKDMDLYTGN GDTVEPMPHS GGKSADRDIL HETYNTRYQS GRE
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