| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1544 |
|---|
| Symbol | |
|---|
| ID | 4461089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1902929 |
|---|
| End bp | 1903471 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639702311 |
|---|
| Product | NusG antitermination factor |
|---|
| Protein accession | YP_845666 |
|---|
| Protein GI | 116748979 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0250] Transcription antiterminator |
|---|
| TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.52343 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.525349 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTTTT TCGTGGCCAA GTCATGGTAC ATAGTCCATA CGTACTCGGG TTTTGAGCAC
AAGGTCAAAT CGGCGTTGGA AGAACGTATC AAGGCCGAAG GAAAGGGGTC TTTGTTCGGT
CAGATCCTGG TGCCCACCGA GAAAGTGATC GAACTGGTGA AGGGGCAGCG CAAGGCCTCC
TCGCGAAAGT TCTATCCCGG TTACATTCTC GTACAGATGG AACTGAACGA CGATACCTGG
CATCTGGTGC GGCATACCCC GAAGGTCACG GGTTTCATAG GCAGTCAGGA ACGCCCCATC
CCTCTTTCGG ACGAGGAGGC GGAGACGATC ATCCTGCAAA TGGAGGAAGG CGCCCAGAAA
CCTCGTCCGA AATTCCGTTT CGAAAAAGGA GACGAGGTTC GTGTCGTGGA CGGTCCTTTC
GCCAGTTTCA ACGGGATCGT GGACGAAGTC ATGCCGGACA AGGGAAAAGT GCGGGTTCTG
GTGAGCATCT TCGGCCGCTC CACGCCGGTG GAGCTGGACT TCGTGCAGGT GAACCGAATC
TGA
|
|---|
| Protein sequence | MGFFVAKSWY IVHTYSGFEH KVKSALEERI KAEGKGSLFG QILVPTEKVI ELVKGQRKAS
SRKFYPGYIL VQMELNDDTW HLVRHTPKVT GFIGSQERPI PLSDEEAETI ILQMEEGAQK
PRPKFRFEKG DEVRVVDGPF ASFNGIVDEV MPDKGKVRVL VSIFGRSTPV ELDFVQVNRI
|
|---|
| |