| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0713 |
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| Symbol | |
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| ID | 4461275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 867782 |
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| End bp | 868855 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639701475 |
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| Product | D-alanine--D-alanine ligase domain-containing protein |
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| Protein accession | YP_844846 |
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| Protein GI | 116748159 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.323281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGCG CGCGGCCCGG GACGCCGGTT GTTGCGCCGA GTGCCGTGCA CGATCGTTTC
CCAAAGTGCC TTTTCATGAT GAACACAATT GTGCTGCACG GTCTGGTCCC GGAAGGGGCG
GCGCAGGACG AGGCGGACGT GCTGGTTCAG GCCGGGGCCG TTTCGACCGC ACTCGCCGCT
CTCGGGCATC TCCCGCGCCT TCTCGCCCTG AACATGGACC TGCAGGCTGC AATCGACGAG
TTGCTGGGCA TCCGGCCCCG GCTGGTGTTC AACCTCGTGG AAAGCATCAA CGGATCGGGC
AGATTCATTC ATTTCGCTCC GTCAATTCTC GAACACCTGC GCATACCATT TACCGGGGCG
AGAGCCGACG CCATCCTGTC GACCTCCAAC AAGCTGCTGG CAAAAAGACT CCTGGATCGA
GCGGGGATTC GGACTCCGCC ATGGTTTGAA AAACCGGGGG GGGCTCGGCG TCATCCGGGC
AGTCCCTTTC CTGCCGGCAC CTGTCTCGTC AAGTCCGTAT GGGAACACGC ATCCATTGGA
ATCGACGAAA ATTCGCTGGT TCAAGCCCGC GACGCCGGGG ACCTGATGGA ACCGATCCTC
CAGCGTGAAG CGATGCTCGG AGGGGAATGG TTTGCCGAAT CGTTTATCGA AGGGCGGGAA
TTCAACATCT CGCTGATCGA GGAGGCCGGC CGGGTTCGAG TCCTTCCGCC CGCGGAAATC
CTGTTCCGGG GCTTTCCATC CGACACGCCG AAGATTGTCG GTTACCGGGC GAAGTGGGAA
ACCGGCTCAT TCGAGTTCCG GAACACACCC AGGACATTTG AATTCGCCGC GGAAGACGAA
GGGCTCCTGC GCCGGTTGAG CGAGATCTCG ATGAACTGCT GGGAGCTTTT CGGTCTCAAC
GGTTACGCGA GAGTGGACTT TCGGGTCGAC GGGGTGGAGG TTCCGTGGGT CCTGGAGGTC
AATGCGAATC CTTGCCTGTC GCCGGATGCC GGTTTCATCG CCGCAGCCGC GAGGGCCGGA
CTCAGTTACA CGGACGTCAT CGACAGAATC GCGTCCGGCG CGCGATGCGG ATGA
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| Protein sequence | MSRARPGTPV VAPSAVHDRF PKCLFMMNTI VLHGLVPEGA AQDEADVLVQ AGAVSTALAA
LGHLPRLLAL NMDLQAAIDE LLGIRPRLVF NLVESINGSG RFIHFAPSIL EHLRIPFTGA
RADAILSTSN KLLAKRLLDR AGIRTPPWFE KPGGARRHPG SPFPAGTCLV KSVWEHASIG
IDENSLVQAR DAGDLMEPIL QREAMLGGEW FAESFIEGRE FNISLIEEAG RVRVLPPAEI
LFRGFPSDTP KIVGYRAKWE TGSFEFRNTP RTFEFAAEDE GLLRRLSEIS MNCWELFGLN
GYARVDFRVD GVEVPWVLEV NANPCLSPDA GFIAAAARAG LSYTDVIDRI ASGARCG
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