| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0405 |
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| Symbol | |
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| ID | 4461428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 486487 |
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| End bp | 487233 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639701160 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_844540 |
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| Protein GI | 116747853 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTTG TGACTCACGA GGACTTCAAG CAGGTGTATA CCCATGAACC CGCGGCGGCC
CCGGGCCGGA TTGAGGCGAT TCTCGGCGCC ATCCGCGACG AGGCGGTCTT CGAGGATGCC
TATCCCGCCG GAGCGGAGGA CATTGCCGCC ATCCACAGCA AGTCGCACAT ACAGAGCGTC
ACGCACCAGG GATTGTACAA CATCGCCTGC CTCGCCGCCG GAGGCGCGAT CCAGACCGCT
CTCACCGGGC TCAAGGAACC CTGCTTCGGC CTGATCCGGC CTCCCGGCCA TCATGCATCG
GCGGACAGTT ACTGGGGGTT CTGCTACTTC AACAACATGG CCGTGGCCCT GGACCACCTG
AAGCGAAACG GGCATATCAA GACGGCATAC GTGCTCGATT TCGACATGCA CTACGGCGAC
GGCACCGTGA ACATCCTGAA GCCCAAAGGG TACGTCGCCA TTCACAACCC CGAATCGCAC
GATCGAAAGG AATACCTCTC GGACGTGTCC AGGCATCTCG AATCCGCGGC GGCGGACATC
ATCGCCGTGT CGGCGGGGTT CGACAATCAT GTCCAGGACT GGGGCGGAGT CCTGCTGACC
GAGGACTACC AGGCCATGGG CCGCATGGTC CACGACACCG CAAAACGGCT GCAGGTCGGC
TGTTTCGGCC TGCTCGAGGG CGGCTACAAC CACCAGGTGC TGGGCGAGAA CGTGCGGGCC
TTTCTTCGCG GCCTGAGCGG GTCGTAG
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| Protein sequence | MKVVTHEDFK QVYTHEPAAA PGRIEAILGA IRDEAVFEDA YPAGAEDIAA IHSKSHIQSV
THQGLYNIAC LAAGGAIQTA LTGLKEPCFG LIRPPGHHAS ADSYWGFCYF NNMAVALDHL
KRNGHIKTAY VLDFDMHYGD GTVNILKPKG YVAIHNPESH DRKEYLSDVS RHLESAAADI
IAVSAGFDNH VQDWGGVLLT EDYQAMGRMV HDTAKRLQVG CFGLLEGGYN HQVLGENVRA
FLRGLSGS
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