Gene Sfum_0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0369 
Symbol 
ID4460886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp440851 
End bp441702 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content61% 
IMG OID639701124 
Productpantoate--beta-alanine ligase 
Protein accessionYP_844504 
Protein GI116747817 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.397358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCA TCGAAACGGT TTCCGAGATG CAGCAGCAAG CCGATGATTG GAGGAGAGCG 
GGGAAAAGGA TTGGATTCGT GCCCACTATG GGCTACTTCC ACGAAGGACA TCTCATGCTG
ATGAGGAAAG TCCGGGGAGA GGCCGACATG GTGGTGGCGA GCATTTTTGT GAACCCCGCG
CAATTTGGTC CCAACGAAGA TCTGGCCACG TATCCCCGGG ACCTGGACCG CGACCTTCGC
CTGGCGGGGG AGGTCGGAGT GGACGTGGCC TTTGTGCCCC AGGTCGGGGA GATGTACCCC
GACGGGTACC AGACCTACGT CGAGGTGACG AAGGTAACGG CCCCGCTGTG CGGGCGCAGC
CGTCCCCTGT TTTTCAGGGG TGTGGCGACG GTGGTGGTCA AGCTGTTCCA CATTGTCAAA
CCGCACGTGG CCGTTTTTGG AGAAAAGGAT TACCAGCAGC TGGTGACAAT CCGGCGCATG
GTCAAGGATC TCAACCTGGA TATCGAAATC CTGGGGCATC CCATCGTCCG GGAACCGGAC
GACCTGGCGA TGAGCAGCCG GAACAAGTAC CTGACGCCCG AGCAGCGGCC GTTGGCGCTG
CGCCTGAGCC GGGCGCTCAA AGCGGCCCGT GCGCGGGTTG CACTGGGGGA AAGAAACGGG
TCCGTCATCC TGAAGGAAGT GAAGGAGTTG TTGGACGCCG GAGGCGAAGT CAGAATCGAT
TACGCGGAGT TGCGTGACCC CGCGACCATG GAGGAAGTCG GCAGTATGGA TGGTCCGTCG
CTGCTGGCCC TTGCGGTCTT TGTGGGGACC ACGCGGCTCA TCGACAATTG CATTCTGCGG
CCGGCGGCCT AG
 
Protein sequence
MRIIETVSEM QQQADDWRRA GKRIGFVPTM GYFHEGHLML MRKVRGEADM VVASIFVNPA 
QFGPNEDLAT YPRDLDRDLR LAGEVGVDVA FVPQVGEMYP DGYQTYVEVT KVTAPLCGRS
RPLFFRGVAT VVVKLFHIVK PHVAVFGEKD YQQLVTIRRM VKDLNLDIEI LGHPIVREPD
DLAMSSRNKY LTPEQRPLAL RLSRALKAAR ARVALGERNG SVILKEVKEL LDAGGEVRID
YAELRDPATM EEVGSMDGPS LLALAVFVGT TRLIDNCILR PAA