| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0181 |
|---|
| Symbol | |
|---|
| ID | 4461653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 217346 |
|---|
| End bp | 217834 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639700936 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_844318 |
|---|
| Protein GI | 116747631 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.243572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGGT TTCTGATCGC CTTGGACTGC ACGCCCGGTC CTCTGAGGAG TGTTCATTAC
GTCAATCGAG TGTTGCGGGG GGCGGTGGAT TCGGGTTTCG TGCTTTTTCA CGTTTTGCCC
ACGGCCTCGC CCAACCTTTT GAAGCGGGCC GAGGTCCAGC GCCTGGAGAG TCTCCAGGAG
GAATCCCCGC GTCTGCGCGG ATACTTTTGG AAGCGAGAAG ACGAGGAGCG GATGGACCGG
ACTTTCCGGG AGGCTCGACA ACTGCTGATC GAAGGCGGTT TCGCGGAGTC CGGGATCGTT
ACGCACTTTG CCTTGGAATC CGACGAGATT GCGCAGATCA TTTTCGACGC AGCCCGGGAA
ATGGGGTGTT CCACGGTCGT GGTTGGGCGC AGGAGGCTCA GCCGGGTGAA GGAGCTTCTG
CTCGGCAGCG TGTCCAACTC CCTGGTGAAA CTGGCACGCG GGATTTCCGT CTGGGTTGTG
GACTATTGA
|
|---|
| Protein sequence | MERFLIALDC TPGPLRSVHY VNRVLRGAVD SGFVLFHVLP TASPNLLKRA EVQRLESLQE
ESPRLRGYFW KREDEERMDR TFREARQLLI EGGFAESGIV THFALESDEI AQIIFDAARE
MGCSTVVVGR RRLSRVKELL LGSVSNSLVK LARGISVWVV DY
|
|---|
| |