| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3782 |
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| Symbol | |
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| ID | 4280675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4503464 |
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| End bp | 4503910 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638136595 |
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| Product | methylation site containing protein |
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| Protein accession | YP_752448 |
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| Protein GI | 114564934 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGGTA TTAACCAAAT CAAAAACGCT AAGGGTTTCA CTCTTATCGA ATTAATGATC
GTAGTCGCGA TCATCGGTAT TTTAGCTGCA ATCGCACTGC CTGCTTATCA AGACTTCACT
AAACGTGGTC ATGTTTCTGA AGGTTTAAGT TTAGCTGCTG GAGCAAAAGC TTCAGTGACA
GAATATTACG CGACTCAAGG TGCATTTCCT ACAACCAACG CACTTGCAGG GCTTGCTGCT
GCTACGGATA TTAAAGGTAA TGCTGTAGTC AGTGTAACAG TTGGAGCTCT TGGACAAATC
ACAGTTTTGT TTAATGACAA AGTTTTAGCA ACTTCTACAT TAACTTTAAC TCCATCACTT
GCAGCAAATT CGACAGGAAG TATATCTTGG ACATGTGCTG CTGGTACAGC AATGGAAGAT
GCTTGGATTC CATCAAACTG CCGTTAA
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| Protein sequence | MKGINQIKNA KGFTLIELMI VVAIIGILAA IALPAYQDFT KRGHVSEGLS LAAGAKASVT
EYYATQGAFP TTNALAGLAA ATDIKGNAVV SVTVGALGQI TVLFNDKVLA TSTLTLTPSL
AANSTGSISW TCAAGTAMED AWIPSNCR
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