Gene Sfri_3754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3754 
Symbol 
ID4280647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp4461207 
End bp4461755 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content41% 
IMG OID638136567 
Producthypothetical protein 
Protein accessionYP_752420 
Protein GI114564906 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCTGG CATTGGCTTT TTTCACCGGA GGTTGTGCAG TTCTTTATGT TGTAGGGCTG 
TGGCATACCG ATGAATTGCA AAGGTTAAAT CAACAAGCAA ACAGCACAAA AAGTCGGTTA 
ACTAACCAAA AGACACAGCT AGAACAACAA ATTGCTTTAC GTAAACCTAA TGCAGATTTG 
GTAGCAAAGG TTGAACTTGA ACAACAACGA TTAGATCTTA AAAAACTACT AAAAGATGAG 
CTTAGTCAGC GCAAAACGAT GATAAGCCAG GGTTACTCGC CAATGTTGAC CGACTTGGCT 
GCCGTGGCAG ATAGCAATGT GTGGTTGAGT CATATTACTA TTGAGCAACA AAACACTAGC 
GCTCAGCGAA TTGAGTTTGA AGGTTATGGT CGTAACCCTC AAAGTATTCC ACTGTGGATT 
GATAAATTAA AAACTACTTC AACGTTAAAA GGTTATGCAT TTTCAGCGAT GACAATGGAC 
CGCGGTGAAG TACAGCCGTT GGCGTTTAAA TTGATAAGTC AGCCCGTTGC TAAGGAGCTC 
GCACAATGA
 
Protein sequence
MMLALAFFTG GCAVLYVVGL WHTDELQRLN QQANSTKSRL TNQKTQLEQQ IALRKPNADL 
VAKVELEQQR LDLKKLLKDE LSQRKTMISQ GYSPMLTDLA AVADSNVWLS HITIEQQNTS 
AQRIEFEGYG RNPQSIPLWI DKLKTTSTLK GYAFSAMTMD RGEVQPLAFK LISQPVAKEL 
AQ