Gene Sfri_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3546 
Symbol 
ID4280439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp4214593 
End bp4215225 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content48% 
IMG OID638136358 
Productcytochrome c family protein 
Protein accessionYP_752212 
Protein GI114564698 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAT CCTTGTACAA GTTCGCTGCA TTGGCTGGCA TAACGATGTT GACTGTTATG 
ACAGCAGAAG CTGCAGAAAC AACTCCCCCA CAACTGCCGG TTCCAGCCGC GGCTCAGCTG 
TGTACTTCTT GCCACGGTGC ACAAGGTCAA GGTATCGATA TTATTGGCCC TCGTTTAGCA 
GGCTTATCTG CCGATTACAT CAGCAATCAA CTTGCGTTAT TTCATGCAGG TAAACGTCAA 
AACCCAACCA TGTTGGCAAT GGCTGCTACG GTGCAAGGTG ACAATATTGC TGTTGTGGCG 
CAATATTTTA GTCAGCAACC TGTTGCAGAC ATTCCGCTCC AATTTCGCGG TGACAAGGTT 
GGTATTAGCG ATCCTTTCGA AACATTAGCC TTTCAAGGTG ATTGGTCACG TACCATTCCA 
GCGTGTGTAA GTTGCCATGG TCCGTCTGCC GTGGGGGGCG GGCAGTTTCC TCGTTTAGCG 
GGGCAACAAG CCAGTTACCT TAAAACTCAA TTGTTAGCCT GGCAAGAGGG CTCTCGCACA 
GGCGATGCTG ATAACATGAT GGGCAATATT GCGCTGAAAT TAACGGCTGC TGAAATCGAT 
GGGTTATCTC AGTTTTTTGC CAATATAAAA TAA
 
Protein sequence
MKTSLYKFAA LAGITMLTVM TAEAAETTPP QLPVPAAAQL CTSCHGAQGQ GIDIIGPRLA 
GLSADYISNQ LALFHAGKRQ NPTMLAMAAT VQGDNIAVVA QYFSQQPVAD IPLQFRGDKV 
GISDPFETLA FQGDWSRTIP ACVSCHGPSA VGGGQFPRLA GQQASYLKTQ LLAWQEGSRT 
GDADNMMGNI ALKLTAAEID GLSQFFANIK