| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3506 |
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| Symbol | |
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| ID | 4280400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4176009 |
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| End bp | 4177547 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638136319 |
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| Product | Alpha,alpha-trehalase |
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| Protein accession | YP_752173 |
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| Protein GI | 114564659 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1626] Neutral trehalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.629584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAGA TCTATGATTC AACCAATCAA GCTAGACAAA GCTTGATGTT TTTTGAAAGT
GATTTATTTA AAACGGTACA AATAAGTCAT ATTTTTACCG ACAGTAAAAC GTTTGCAGAT
GCGATTCCAC GCATTGCCAT GAACGATATT CTAAATGAAT TCAATAAAAT CAGTAGCAAC
TTATCTAAAG CTGAATTACT GCAATTTATA GCCAATTATT TCGAACTACC AGAATATCAA
AGCATCGTCA TAAATAATCC TTCTGCTGAT ATTGATAAAT ATATAGATAC CTTATGGGGC
AAACTTGAAA AAGCAGCAGA TAAGCAAATC CCTGGTTCGC TATTGCCTTT GAATGGAAAA
TATATCGTAC CTGGCGGTCG TTTTAGAGAA ATATATTACT GGGATAGTTA CTTCACCGCA
TTAGGGTTAA TAGAAGCAAA CAAGGTTGAT ATTGTCGAAT CTATGTTCAC TAATTTCGTC
GACCTGCAGA AAAGATATGG TTGTATACCT AATGGCAACC GCAGCTATTA TTTATCCCGC
TCTCAACCTC CTATTTTAGG GTTGATGTTA GAACTATTAC TTCCCTTTCA AAACAATTCA
AAGCTGTTTT TAGCTCAACA TCTCCAAGCA ATTGAAACAG AATATCAGTT TTGGATGCAG
GGAAATGAAT CACTGTCCGC TGATAATAGT GAATTCAAAC GGGTCGTAAA AATGCCAAAT
GGCTGTATTT TGAATCGTTA TTGGGATGAT TCAACATCAC CAAGACCTGA ATCATATCGC
GAAGATATGG AGTTAATGAA TAGTTTACAT GCTAATCAAG ATACTTTTTT TAGACATATA
CGTGCTGCTT GTGAATCGGG TTGGGATTTT AGTTCTCGCT GGTTATCTGA CATCAACTCA
TTAGCCAGTA TTAATACCAC TAATATTGTT CCAGTGGATT TAAACTGCTT ATTATATAAA
TTAGAAAAAC TATTATCTGA ATACCATTCT TCATTGAATA ATGTGCTTAA GAGTAACCAC
TATGAGCACC TTGCTGAAAC CAGAAAAACC GCCATTAACC AATATATGTG GTGCCCTGAG
CAGCAATTCT TTTTTGATTA CAATATCAAG AGTCACAATA TGAGTTCGGT AAAATCATTG
GCTGCCACTT TGCCATTATA TGTTCAATTA GCAAGCCAAT TGCAGGCCGA CTCAGTCAGT
AACATCCTTA AGAATGAGTT CCTAAAAGTT GGCGGACTCG TCACCACAGT AAATTCCACA
GAGCAACAAT GGGATGCACC GAACGGATGG GCACCATTGC AATGGTTTGC CACTCAGGGA
CTATCTACCT ATCATCATAA CTCGCTTGCT AATGACATTA AACAACGCTG GATATCGACA
ATAGAAACGT ATTTTACCCA AACAGGTAAA TTAATGGAAA AGTACAATGT TTGTCAGCAA
ACACAGAAAG CTGAAGGCGG TGAGTATGAT GTTCAAGAGG GTTTTGGGTG GACAAATGGC
GTCTATCTTG CTTTTAAAAA ACAATTGAAA GCCAAATAA
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| Protein sequence | MEQIYDSTNQ ARQSLMFFES DLFKTVQISH IFTDSKTFAD AIPRIAMNDI LNEFNKISSN
LSKAELLQFI ANYFELPEYQ SIVINNPSAD IDKYIDTLWG KLEKAADKQI PGSLLPLNGK
YIVPGGRFRE IYYWDSYFTA LGLIEANKVD IVESMFTNFV DLQKRYGCIP NGNRSYYLSR
SQPPILGLML ELLLPFQNNS KLFLAQHLQA IETEYQFWMQ GNESLSADNS EFKRVVKMPN
GCILNRYWDD STSPRPESYR EDMELMNSLH ANQDTFFRHI RAACESGWDF SSRWLSDINS
LASINTTNIV PVDLNCLLYK LEKLLSEYHS SLNNVLKSNH YEHLAETRKT AINQYMWCPE
QQFFFDYNIK SHNMSSVKSL AATLPLYVQL ASQLQADSVS NILKNEFLKV GGLVTTVNST
EQQWDAPNGW APLQWFATQG LSTYHHNSLA NDIKQRWIST IETYFTQTGK LMEKYNVCQQ
TQKAEGGEYD VQEGFGWTNG VYLAFKKQLK AK
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