Gene Sfri_3460 details

Gene Information

• Locus tag: Sfri_3460
• ID: 4280357
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 4114890
• End bp: 4115498
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 638136276
• Product: group II intron, maturase-specific domain-containing protein
• Protein accession: YP_752130
• Protein GI: 114564616

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATAGCTG ATTTCTTAGC GGAAAGAGGC TTAACACTCT CCGAAGAGAA AACGCATATT 
ACCCACATCA ACAATGGTTT TGACTTCTTA GGGTTTAATC ATAGGAAGTA CAAAGGAAAA 
TTGCTCATTA AACCGAGTAA ATCCAACACG TTGTTGTTCT TAAGTAACCT GCGCGAACTC 
ATCAAAAAGC ACGCAACCAT CCCTGTTAAC GACCTTATCA AACTGATAAA TCCGAAACTA 
AGGGGGTGGG CGAATTATTA TCGTCATTGC GTTGCTAAAC AAGTATTCGG GTATGTTGGG 
CACAAACTAT TCTATTCGTT ATGGCACTGG GCAGTAAGGC GCCATCCAAC AAAGTCTAAG 
ACTTGGGTAG CCCTTAAATA CTTCATCAAC CGAAAAGGCC AATGGCAATT TCACGGTTGG 
CAGAAGGTCA AGGATATGGA TTGCCAATTC AATCTATTCC AAATAGCCAA AGTGCCTATT 
GAGAGACATG TGAAAATTCG AAGTGCGGCT ATACCATTCG ATCCTCAATA CCAAGAATAC 
TTGGCTAGGA GAAAATCGAA AAGGCAAGCT CGTAACGCTT GGAATGAACC TGCTCTCACT 
GCTTTATAA 

 

Protein sequence

MIADFLAERG LTLSEEKTHI THINNGFDFL GFNHRKYKGK LLIKPSKSNT LLFLSNLREL 
IKKHATIPVN DLIKLINPKL RGWANYYRHC VAKQVFGYVG HKLFYSLWHW AVRRHPTKSK 
TWVALKYFIN RKGQWQFHGW QKVKDMDCQF NLFQIAKVPI ERHVKIRSAA IPFDPQYQEY 
LARRKSKRQA RNAWNEPALT AL