Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3209 |
Symbol | |
ID | 4280111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3841813 |
End bp | 3842580 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638136027 |
Product | Na(+)-translocating NADH-quinone reductase subunit C |
Protein accession | YP_751884 |
Protein GI | 114564370 |
COG category | [C] Energy production and conversion |
COG ID | [COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC |
TIGRFAM ID | [TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0626162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTTTA AGAAAGATTC AGTCGCTGGA ACAATGGTTT TTATCATCAT TTTAAGTCTA GTTTGCTCAT TTATGATCAC CGGTACCGTG GAGATTTTAA AAGAACGTAA GCTGGCTAAA AAGCGCGAAG AAGTGCAGCA GTTTGTGTTA AAAGCTGCGG ACATCGACAT CAGTCAAGGT GACTTTAGCG AGTTATTTGC CCAACGAGTA AAGCCTAAGA TGGTTAACTT AGCGACAGGC AAGGTAACTG AAAAAGCCAA TTTACTTGAT TTTGATGAGC GCATGGCATC GATTAACCCA GAAACATCTT CTAAACCGAA AAAAGACACC GCCAAAATTA AAACCATGGC GAACGACATT CGTATTTTTG AGGTGTATGA CACCAATGGC CAACTTGCCA GCATTGTTAT GCCGATTTAT GGCAAAGGTT TGTGGTCGAT TATTTACGGT TACATGGCGA TAAAACCAGA CTTAAACACT ATTGAAAACA TCGTGTTTTA TGAGCATGGC GAAACCCCTG GTATTGCTGA CTTTGTTACC GACCCACAAT GGTTAGCACT ATGGAAAGGC AAAAAGCTAT TTAATGAAAA AGGCAAAATT GCCATTAAGG TTATTAAAGG CGGCGCTAAA GACGGCGACA TTCACGGCAT CGATGGTGTT AGTGGTGCGA CGCGCACGGG CGTAGGTATT CAACGCTTAG TCGAGTTTTG GTTTGGCGTC GAAGGGTATC AAACCTATCT ACACACGTTA GCTGCGGAGG GTAAGTAA
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Protein sequence | MAFKKDSVAG TMVFIIILSL VCSFMITGTV EILKERKLAK KREEVQQFVL KAADIDISQG DFSELFAQRV KPKMVNLATG KVTEKANLLD FDERMASINP ETSSKPKKDT AKIKTMANDI RIFEVYDTNG QLASIVMPIY GKGLWSIIYG YMAIKPDLNT IENIVFYEHG ETPGIADFVT DPQWLALWKG KKLFNEKGKI AIKVIKGGAK DGDIHGIDGV SGATRTGVGI QRLVEFWFGV EGYQTYLHTL AAEGK
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