17 homologs were found in PanDaTox collection
for query gene Sfri_2970 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008345  Sfri_2970  hypothetical protein  100 
 
 
158 aa  330  6e-90  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.466871  n/a   
 
 
-
 
NC_007954  Sden_2805  hypothetical protein  68.35 
 
 
157 aa  233  9e-61  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1318  hypothetical protein  63.19 
 
 
163 aa  221  2e-57  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_3056  hypothetical protein  63.8 
 
 
163 aa  221  3e-57  Shewanella sp. ANA-3  Bacteria  normal  0.469706  normal  0.0518674 
 
 
-
 
NC_008321  Shewmr4_2878  hypothetical protein  63.19 
 
 
163 aa  219  8e-57  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00543287  hitchhiker  0.000193701 
 
 
-
 
NC_011663  Sbal223_3141  hypothetical protein  61.35 
 
 
163 aa  219  9.999999999999999e-57  Shewanella baltica OS223  Bacteria  normal  0.335339  normal 
 
 
-
 
NC_009997  Sbal195_1249  hypothetical protein  61.35 
 
 
163 aa  219  9.999999999999999e-57  Shewanella baltica OS195  Bacteria  normal  0.320238  normal  0.0944215 
 
 
-
 
NC_009052  Sbal_1172  hypothetical protein  61.35 
 
 
163 aa  219  9.999999999999999e-57  Shewanella baltica OS155  Bacteria  normal  0.0188843  n/a   
 
 
-
 
NC_008322  Shewmr7_2960  hypothetical protein  62.58 
 
 
163 aa  218  1.9999999999999999e-56  Shewanella sp. MR-7  Bacteria  normal  0.373099  hitchhiker  0.00896796 
 
 
-
 
NC_009831  Ssed_1111  hypothetical protein  65.13 
 
 
159 aa  218  3e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1216  hypothetical protein  60.74 
 
 
163 aa  217  5e-56  Shewanella baltica OS185  Bacteria  normal  0.445968  n/a   
 
 
-
 
NC_010506  Swoo_1213  hypothetical protein  64.94 
 
 
158 aa  216  1e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0437214 
 
 
-
 
NC_009901  Spea_0997  hypothetical protein  62.89 
 
 
159 aa  215  2e-55  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1130  hypothetical protein  60.78 
 
 
153 aa  210  5.999999999999999e-54  Shewanella putrefaciens CN-32  Bacteria  normal  0.165556  n/a   
 
 
-
 
NC_008700  Sama_0851  hypothetical protein  57.59 
 
 
157 aa  202  2e-51  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.403973 
 
 
-
 
NC_009092  Shew_1023  hypothetical protein  56.96 
 
 
159 aa  199  9.999999999999999e-51  Shewanella loihica PV-4  Bacteria  normal  0.0312213  normal 
 
 
-
 
NC_009656  PSPA7_2619  hypothetical protein  26.27 
 
 
148 aa  42.4  0.002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.817565  n/a   
 
 
-
 
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