| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2621 |
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| Symbol | |
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| ID | 4279528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3136860 |
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| End bp | 3138107 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638135417 |
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| Product | tetratricopeptide domain-containing protein |
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| Protein accession | YP_751300 |
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| Protein GI | 114563787 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.15781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAAG TTACTAGTAT CGCTACAGCG TTATTACTTT CCGTCTGTGG AAGTGCATTA
TTGTCTAACA CTGTAGTTGC TGCGGAAAAG TGTGAGATTG ACAAGCGTCA ATCTCGTGCC
GTTGGCGAAA GCGCTGCAAA AAAAGTACAA AAATCTTTTG GAGCATATAC TGAAGGAAAT
TTAGACCAAG CAATTGCAAT ATTGCTTGAG GCTAATGCTA AAAACGACTT CGACAAAGCG
TATGTCGATC GTATGTTAGG TAACTTCTAT GCCGAAAAAG GTCAGATGAA GACAGCAATC
AAATATTTGA AGACTGCTGT TGATGCTGAC ATTCTTGGTG GTACAGATCA TGCTGCAACA
ATGCGTTTGT ATGCTGATTT GTTACTACAA GAGAAAAAGT TTAAAGAAGC GATTCCATAT
TATTACAAGT GGATGGATTT TACCTGTAAG GCAGATGCTC AAATGTATCG TCGAATTGGT
ATTGCCTACA CTGAGTTAAA AGATTGGAAT AAAGTACTAC AAGTCGCTGA CAAAGGTTTA
TCTTTAGCTG AATCGCCTGA TAAAGGTCTG TATCAGATGA AGTTAACCGC TTACTTTAAC
CAGAAAAAGT ACAAAGAAGC CGTAAAAGTA TTAGAAACTA TGGTGCCTTT GTTCCAAGAC
GACAAACGTC TCTGGGTTCA GTTAGCTCAG TTTTACTTGA TGACTGAAGA CTATGATAAA
TCACTTGCAA CATATGATTT AGCATATAAA AATGGCTTTT TAGAGACTGA CAGTAATATT
ACTCGTTTGT CTCAATTGTT AGCGCAAAAA GGTTCGCCTT ACAAAGCTGC TACCATTTTT
GAAAAGCACA TGAAGTCTGG TTTAGTTGCA GAAAACGAGA AGAGTTTAAC TACACTCGCT
GGTTTTTATC ATAATGCTAA AGAGCTAAAA GAAGCTGCTT ACTTTTACGG TAAAGCAGCT
GCCATTAGCA ATAAGGGTGA ATTGTATTTA AAACAAGGTC GTATTCTTGC TTTAGAACAA
AAATACAATG ATGCTATTCC TGTGCTTAAA AAAGCACTTG ATGCAGGTAT TGATAACCCG
GGTGAAGCTC AATTTGAGCT AGCTTTAGCA TACTTGAGCC TTAAAAAGTA CAAGTCTGCT
TATAACCGAG CTGTTCTTGC TGCTAATGAT AAAAAGACTG AACGTAGTGC TAAGAGCTAT
ATTTCTTACA TCAAAGAAAA AGCTCGTATT CACAACGTAA CGCTTTAA
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| Protein sequence | MRKVTSIATA LLLSVCGSAL LSNTVVAAEK CEIDKRQSRA VGESAAKKVQ KSFGAYTEGN
LDQAIAILLE ANAKNDFDKA YVDRMLGNFY AEKGQMKTAI KYLKTAVDAD ILGGTDHAAT
MRLYADLLLQ EKKFKEAIPY YYKWMDFTCK ADAQMYRRIG IAYTELKDWN KVLQVADKGL
SLAESPDKGL YQMKLTAYFN QKKYKEAVKV LETMVPLFQD DKRLWVQLAQ FYLMTEDYDK
SLATYDLAYK NGFLETDSNI TRLSQLLAQK GSPYKAATIF EKHMKSGLVA ENEKSLTTLA
GFYHNAKELK EAAYFYGKAA AISNKGELYL KQGRILALEQ KYNDAIPVLK KALDAGIDNP
GEAQFELALA YLSLKKYKSA YNRAVLAAND KKTERSAKSY ISYIKEKARI HNVTL
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