| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2471 |
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| Symbol | |
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| ID | 4279382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2945933 |
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| End bp | 2948806 |
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| Gene Length | 2874 bp |
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| Protein Length | 957 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135267 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_751154 |
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| Protein GI | 114563641 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.464894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCTA ATTCACATTT AGCCAAAGCT ATTCGCTTTG CGCTAATCAG TGGCGTTGCC
GTTTCTGCAG CAACCACATT CAATACTGTT GCAGCAGAAG ACGCAGCGAA TACTGCACCT
GCTGTCGAGA GAATCTCGGT AACGGGCTCA CGAATTATTC GTGAAGGTGC TGTTGCACCA
ACGCCAGTTA CAGTAATTAC TGGCGACGAG TTATTATCAA CTGGTGTAAC AAATATTGGT
GAAGCGCTAA ACCAATTACC TGCACTAGGT AACACCTACT CACTTGCCAA CTCAGGCCGC
TTTATTGGTA CTTCGGGTCT TAACTTACTC GATTTAAGAA GCATGGGTAC CGCCAGAACA
CTCGTGTTAG TGGACGGTAA ACGCCATGTA TCAAGTTCTG CAGGTACTTC TTCAGTCGAC
GTCAATACCA TTCCAAGTGT ATGGATCGAT AGAGTTGAAG TAATTACCGG CGGTGCATCT
GCAATTTACG GTGCCGATGC GGTAACCGGT GTTGTAAACT TCATTTTAAA GAAAGATATT
AATGGCTTAG ATGTATCTGC AACCAAAGGT TGGGCTGACG ATAGTGGTCA CAATAAAGAC
CGTTTCTCAT TATCTTATGG TTCTGATTTT GCCCAGGGTG ATGGTAACGT TGCCTTTGCG
GTTGAGTACA GCGCTCAAGA GCAATTAAGA GCATTTGATC GCGATCAGAC TTCAACTGCT
TTTTCGAGCC TAGCAAATAA AAACCGCACT GAAGATAATA ATGACCCATC AGATCCAGAC
AAAATATGGA CTCCTAATGC AGGTCACTAC ACAATTAGTA ATGCCGGTAC CTTCAATTTA
GATGGTTGGA AAAGCTTTAA CCCTGATGGC TCATTAAGCG ATGTTTATAG CGGTCAAAAT
GTTGATGGTA TTCGTTGTGC AAATTGCGAT GTCACTAACT TAAACCAGTT TGTAGAATTA
CAACCTGAAT TCGAACGTTA CAATATTAAC TTTAAAGCAA ACTACCAGCT TAACGATAAT
CATAACGTTT ATTTTGAAGC TAAATACGTT AACAGCCAAT CAACAGATGA AGGTCAACCA
GCATTTTTCT TTGGTAATCC GGTTAACGAT ATCAAAATTG ATAACGCTTT TATCAATCCT
GAACTGGTTG CTTTAATGAA AGCAAACAAG GATAGCGACG GTAATTCAGC GCCATTAGAT
ACACTTAATA TTCGTCGTTT TATGACGGAC TTGGGTGCGC GCATTGAAGA TGATACTCGC
GAAACTCAAC GTTATGTTAT CGGTCTTGAA GGTATAGTAT TCCAAGATTG GGATTACGAT
GCCTATGCTA TTTATGGTCA AACTGATTTA GAGCGCGTTA ATAAAAATAA CTTAATCTAT
GACAATTACA CCAACGCCCT TGATTCTGTA TTAGAAAACG GGATTGCGGT TTGTCGTGAT
CAGTCAGCTA GAGATGCAGG CTGTGTGCCA GTCAACATTT TTGGTTTTGG CGCACCAAGT
CAAGATGCGA TTAATTATAT TAATACCGCT TCAACTGGTA CATCGATTAT TAAGCAAACC
GTATTAGGTG GCTCACTAAC TAACTCTAGT TTATTTGAAT TACCTGCCGG TTATGCAGGC
TTCTCTACTG GTGTTGAATA CCGTAAAGAA GAAAGTGAGA TATTTGAACC TTCAAATGCA
GCAGGTACTT TCTTCAATGC ATTAGGCGAA GATAAAGGCG ATTTTGATGT AAGCGAAATC
TTTGCTGAAA TCACGCTTCC TTTGTTAGCC GATTTACCAA TGGTACGTCA GCTAGACTTA
GATCTTGCAA TACGCTTTGC TGATTACAGC ACCATTGGTA ATGCTACAAC ATGGAAAACG
GGTTTAAGCT GGGAAGTTGA TGATCAGATC CGCGTTCGTA CTACATACTC AGAAGCTATT
CGTGCACCTA ACATCAGTGA GCTTTATGGT GCTGCAAGCC AAACATTCTT CTCTGTAGAT
GACTCTTGTC GTGCTAAAAA CTTAAATGAT CTGGCTGATC CAACTCAACG CCAAGCTAAC
TGTGCGGCGT TAGGGATCCC TGCTGGTTTT GACGCTGACT ACGACGATAA AACGCTTGAA
GGATTAAGTG GTGGTAATCG CGAGCTACAA GCAGAAGAAT CGAAAAGTTT CACGTTAGGG
ATTGTTTATC AACCTGATTT TATTGATGGT TTATCGATCA CTACCGATTA TTGGAATATT
GAGATCGAAA ATGCCATCAG TGCTGTTGGC GCCCAAGATA TTATCGATCG TTGTGTTGAT
TCTAAATCTG GTGTGAATAA TGAATACTGT AGTTTGATTA CTCGTGATTC AACTAGCCAC
GAAATCACTC AAATTAGACA GTTCTCGTTG AACATTGCGT CGCTTGAAGC TGCTGGTATT
GACTTTGATA TTGGTTATAA CTTTGAAGCC TTTAGTGGTG ACGTACGCAC TAACCTTATT
GCGACTCGTC TACTAAAACG TAAAGACTTT TCATTCCAGG ATGAACCAGA TACCTTTGAA
GAACTTGCAG GCACGGCTGG CTATGCTGAA TGGCAAGCAA ACTGGAGCCT AAGTTACTCA
ATCGATAGCT GGGATGTTAG CTGGAGAACG CGCTATGTCG AGGGTGTAAG CCTTTATACT
GATAAGGAAT TAGCCTTAAA CGCGAATCCT AATAGCAACA TGGAATTTGG CGATTACTTT
ATCAACGATA TGGCAGTTGC ATACAACTTC GATTCAGGTA TTAGATTGAA GTTTGGTATC
GACAACGTGT TTAACCGTGA ATTACCTTAC GGCTACACAG GTACTGATAC TGATAGTTCA
GCTTACGATA ACGTTGGCCG TTTCTTCCAT ACTACGGCTA CTTACAAGTT CTAA
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| Protein sequence | MQANSHLAKA IRFALISGVA VSAATTFNTV AAEDAANTAP AVERISVTGS RIIREGAVAP
TPVTVITGDE LLSTGVTNIG EALNQLPALG NTYSLANSGR FIGTSGLNLL DLRSMGTART
LVLVDGKRHV SSSAGTSSVD VNTIPSVWID RVEVITGGAS AIYGADAVTG VVNFILKKDI
NGLDVSATKG WADDSGHNKD RFSLSYGSDF AQGDGNVAFA VEYSAQEQLR AFDRDQTSTA
FSSLANKNRT EDNNDPSDPD KIWTPNAGHY TISNAGTFNL DGWKSFNPDG SLSDVYSGQN
VDGIRCANCD VTNLNQFVEL QPEFERYNIN FKANYQLNDN HNVYFEAKYV NSQSTDEGQP
AFFFGNPVND IKIDNAFINP ELVALMKANK DSDGNSAPLD TLNIRRFMTD LGARIEDDTR
ETQRYVIGLE GIVFQDWDYD AYAIYGQTDL ERVNKNNLIY DNYTNALDSV LENGIAVCRD
QSARDAGCVP VNIFGFGAPS QDAINYINTA STGTSIIKQT VLGGSLTNSS LFELPAGYAG
FSTGVEYRKE ESEIFEPSNA AGTFFNALGE DKGDFDVSEI FAEITLPLLA DLPMVRQLDL
DLAIRFADYS TIGNATTWKT GLSWEVDDQI RVRTTYSEAI RAPNISELYG AASQTFFSVD
DSCRAKNLND LADPTQRQAN CAALGIPAGF DADYDDKTLE GLSGGNRELQ AEESKSFTLG
IVYQPDFIDG LSITTDYWNI EIENAISAVG AQDIIDRCVD SKSGVNNEYC SLITRDSTSH
EITQIRQFSL NIASLEAAGI DFDIGYNFEA FSGDVRTNLI ATRLLKRKDF SFQDEPDTFE
ELAGTAGYAE WQANWSLSYS IDSWDVSWRT RYVEGVSLYT DKELALNANP NSNMEFGDYF
INDMAVAYNF DSGIRLKFGI DNVFNRELPY GYTGTDTDSS AYDNVGRFFH TTATYKF
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