| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2047 |
|---|
| Symbol | |
|---|
| ID | 4278959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 2425481 |
|---|
| End bp | 2426266 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638134836 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_750731 |
|---|
| Protein GI | 114563218 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.939702 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAC CATTAATTAA CCTTGTGCAT GCCAACGGCT TCCCCGCGGG CAGCTATAAA
ACATTCCTAC AAGAATTTGA TAACGACTTT AGAACCATAG CCCACAATCA GTTTGGCCAT
AATGTACTTT ACCCAATACA CAATAACTGG CAACACTTAG TCACGGAACT TGTTGAATTT
ATTAAGAAGC AAGATGAAAA GGTCATTTGT GTTGGGCATT CATTCGGCGG TGTTATATCG
TTTATCGCTG CCTGCCAACA TCCTGAGCTT TTTCGAGGTT TAGTGATGCT CGATCCACCT
GTCGTCACCG GCGCATTCTC ACATTTGCTG AGTTTTATTA AGCGCACACC TTACATTGAT
AAGCTTTCAC CCGCCGGTAA AGCGAAAACA CGCCAGAACC AATGGCCAGA AAACACTAAC
TTGGTTGATT ATTTTTCACA GAAAACCTTG TTTAAAAATT TCGATTCACG TTGCTTACAA
GACTATGCAT CATCAAGTGT GGTGCTACGC AATAAACGTT TAGAGCTCAG CTTCTCTCCT
GCCGTCGAAG CCGACATTTT CAGGCATTTA CCGACCAACC TTGTTAAGTA CAAAAACAAA
CTGACCGTGC CAGCAAAACT GATTTACGGT GAAAAGACTC AGATATTCCC GATTAAACAT
TTTGTTCGGT TTGCAAAACT GAACGACATC GAGTTAATGA CCCTACCCAA TGGCGGACAC
ATGTTTCCAT TAGAACAACC AGAAAACACC GCCAATATGG TCAAACAGAT CATTAAAGAC
TGGTGA
|
|---|
| Protein sequence | MTKPLINLVH ANGFPAGSYK TFLQEFDNDF RTIAHNQFGH NVLYPIHNNW QHLVTELVEF
IKKQDEKVIC VGHSFGGVIS FIAACQHPEL FRGLVMLDPP VVTGAFSHLL SFIKRTPYID
KLSPAGKAKT RQNQWPENTN LVDYFSQKTL FKNFDSRCLQ DYASSSVVLR NKRLELSFSP
AVEADIFRHL PTNLVKYKNK LTVPAKLIYG EKTQIFPIKH FVRFAKLNDI ELMTLPNGGH
MFPLEQPENT ANMVKQIIKD W
|
|---|
| |