| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1380 |
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| Symbol | |
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| ID | 4277004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1641894 |
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| End bp | 1643309 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638134155 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_750071 |
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| Protein GI | 114562558 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0611611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTTTTT TTCCTTCTAT ATTTTGGATT TTCTTTGATA AAGTATTCTT AATTTTACTG
TCTACATTCT CTTTTTTTAT TTTTGCTATT TACTTAGAAC CTAGTGAGTT AGGTAAAGGT
GTTATGTTTA TAGCGATCCC TGGGTTAATT GCAGGGCTTT TCTCTGGAAT GATAGAGTCT
CCTTTAGTCA GTAAGGATAT AATTGAAGAT GGTGAATATT CAACGGTATT ATGGTTCTCA
GCTATATTAT CAATTGTATT ATTTATTTTT GTAATTGTTA TAGGTTATGT TTTATTAGAA
AATGAAAATG ATCTTTTTTT GTTAGGTATA GCAACTAGCA CAATTATTTT TATTCTAATA
AGTAGACCAT TTTTAGCTAA GCTACGAAGG GATAATAATT TTAAAAGTAT AGCATTACGT
GCTTTTTTAG GGAAATGCAT CGGTTTCATC GGCGGTGTAA GTCTTGCTAT TAAAGGTTAC
GGTGAGTTAT CAATTGTAAT ACAATTTGTG TTGCAAGAAT TTGTTAGCCT TTGTGTTATG
GCATTTACTA TGCGTTCAAT TATTAGTTTT TCTTTCAGCA GTAAGTTATT ATCTAATACA
CTTAGAATGG GGCGTTACTT ATCTATTTCT GCCTTAAGTA ATAGTGTTAT GAATAATGGT
CTTCCATTAG TTTTAGGTAC AGTTTCAGGT ACTGAGTCTG TAGGCTTATT TAATTTTTCA
AATCGAATAG TTGCACTGCC AAGAGATGCG ATATTTAATG GAATAAATAG TTATGCTTTA
CCAAGCTTTG CTAGGGTACA GAGCGATATT ATGGTACTCG AAAAAAAATT TTCAGATTCA
AATCGTTTAT CCTCTCTACT AGTTTTTCCT GTGTTTTCCG GTTTGGCGAT TACCGCACCT
CTTATTATTA ATACTATATT TGGCGATAAA TGGACGGATT CAATTATCTA TCTACAGTAT
CTTGCCTTGA TTGCAATAGT TAGATCGTTA TATTTATTTC ATTCATCCTT ATTTCTTGTA
CTGAAAATCC CTAATATTAT AACAAAAAAA GAATTATTTT CATCGATAAT AGGATTATCG
CTTGTATTTT TATTTGGACG GGATTATGGG CCTGGAGCAG GCGTGTTAGC TACTGGTTTT
TATACATTTA CATGCTTTTT ATGGAATATA TCAGCGATAA AAAAAGCCAT CTCATATCCA
ACTACAAAGT TCATAGGAGA CATTTTTCCT GCTTTTTGTC TGAGCATTAC AATGGTATTT
GTAGTTTACT GGGTAGAAAA TTCTTTATTT TATTTTGATA ATAATATTAA ACTTATTATG
AGTATTTTAT CTGGAATAAT AGTTTACTCA ATCGGTATAC TTTTTTTTGA AAACAAGAGA
GTGGGCCCAA TTTTTCGTCG GAGGTGTAAA AAATAA
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| Protein sequence | MSFFPSIFWI FFDKVFLILL STFSFFIFAI YLEPSELGKG VMFIAIPGLI AGLFSGMIES
PLVSKDIIED GEYSTVLWFS AILSIVLFIF VIVIGYVLLE NENDLFLLGI ATSTIIFILI
SRPFLAKLRR DNNFKSIALR AFLGKCIGFI GGVSLAIKGY GELSIVIQFV LQEFVSLCVM
AFTMRSIISF SFSSKLLSNT LRMGRYLSIS ALSNSVMNNG LPLVLGTVSG TESVGLFNFS
NRIVALPRDA IFNGINSYAL PSFARVQSDI MVLEKKFSDS NRLSSLLVFP VFSGLAITAP
LIINTIFGDK WTDSIIYLQY LALIAIVRSL YLFHSSLFLV LKIPNIITKK ELFSSIIGLS
LVFLFGRDYG PGAGVLATGF YTFTCFLWNI SAIKKAISYP TTKFIGDIFP AFCLSITMVF
VVYWVENSLF YFDNNIKLIM SILSGIIVYS IGILFFENKR VGPIFRRRCK K
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