| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0837 |
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| Symbol | |
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| ID | 4276934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 983548 |
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| End bp | 986115 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133603 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_749528 |
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| Protein GI | 114562015 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.111272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CTAACCTATT GCGTAGTGCT TGCGCCATCG CCGTTTCACT GTCCCTTGCC
CCTATCGCAT TCGTTTCTCA AGCTGCCGAA GCCGGTGCAC AATCAAAAGT TGAACGAATT
GAAGTGACCG GTTCTCGTAT CAAACGGACT GATATTGAAG GACCATCGCC AGTTCAATCG
TTGAATAAAG ACGATATTGC CAACATGGGT TTTGATAACC TACAACAATT GCTTGAACGT
ATGCCTGCAA ACGGTTCTGG CGCATTTTCT ACTCGTGGTA ACAGCCAAGA TTCTACCGCT
AACGGTGGCG CATCAATCAG TTTACGTGGC TTAGGGCCAG ATGCCACTTT GGTACTTATC
AATGGTCGTC GAGTGGGATC GAGTGCCTTT GCTGAAGGGA TTTCGAATTC ATTTGTTGAT
ATCAACAACA TCCCTGTATC AGCAATTGAG CGCATTGATA TTCTTAAAGA CGGTGCTTCA
GCTATTTATG GTTCTGATGC TATCGCTGGT GTGGTTAACA TCATATTAAG AAAAGACATC
GAAGGGCTTG AAATTAACCT AGGTTATGGC GACGACAGCG GTACGGGTTA TGACGAAACT
ACAGCCAGCT TGGTGTGGGG CGTAAAAGCC GACAAAGGCA GTGCGTCAGT TATTCTTGAT
TACTTTACTA ATGGTACTTT GTCAGCAAGC GATATGGGCC GTTTTGGCAC TGCTAACCAA
TCACCTTATG GCGGTGAAGA TTACCGTTCA TCGCGAGGCT TTCCAGGGTA TTTTTATGTT
AATGGTGTGA AAACCATCGA TCCTGATTGC CCCGCTGAGA ATGCCACAGC AAGTGGCAGT
TGTTTGTTTG ATTACGGTCC ATACAATTTA ACCATTCCAA CGTCTGAGCG TGTTGGTGCT
ATTGGCCAAT TTGATTACAT GCTCGGTGAA GATTTAACTG CATTTTTAGA GTTATCTGTA
CAACATAACA CCTCTGAAGC GGGTGGTGCA CCAACGCCAT TAGATGAAGA TGCTGGTTTA
ACCGTGCCTG GTTCTCATCC TAACAATCCA TTTGGACAAG ACATTGATAT CGGTCGTTAC
CGTACAGTTG ATGCTGGCGC ACGTCGTTGG GATATCGAAT CAGATACCAT GCGTATTGTT
GCCGGTCTTC GTGGCGTTAT CAATGATTGG GACTGGGAAG TATCAGCGCA ACGTGGCCGC
AGTGAATCTA CTCAAACCGG TGACCGCTCA CAAGGTTGGG TAAGAACCGA TTACTTACAA
GCCGAAATTG ATGCCGGTAA CTACAACCCG TTTGGCGGCA CTATGAACTC GCAAGATGTG
ATTGATCGCA TCACCACAAG TCTAGTAAGA CAAGGTAAGT CAAGCATCAC AGCTTATGAT
GCGAGTATTT CGGGCCATGC ATTTACCATC GCAGATCGCG ATATCATGAT GGCTGCAGGT
GCAGAATACC GCGAAGAAAG CGTTAGTGAC ATTCCAGATG AGCAGTTCCA ACGCGGTCTT
ATTTTTGGTA CTGAAGCGGT GTCTGCATTT GGTTCGCGTG ATCAACATGC TGCCTATGTA
GAATTATCAA TTCCTATTGC AGATAACTTT GAATTACAAC TTGCCGGTCG TTATGACAGC
TACAGTGACT TTGGTTCAAC CACTAACCCT AAAATTGCTT TCCAGTGGGG TATTAGTGAC
GAGATAACTG CACGTGGTTC TTGGTCCACA GGTTTCCGTG CACCATCATT AGCACAAATT
GGTTTAGGCC CTTCTGAAAA AAGTGACTTT TTAACCGATA GCTATCGTTG TGCCGCAGAT
AACGTCGACT GTGAATTGCT TGACTACAAC TTTATATTTG CTGGCAACCC GAATCTTAAA
GCGGAAGAGT CTGAGACTTG GAACGTCGGT ATGATTTGGG CACCAAGTCA GCAGTTTGAT
ATTGGTTTTG ATTTATACAA TATTCTCCAA GATCACAAAA TTGACTCATT GCAAAACCAA
GATCTTTACG ACGAAAACTG TAATGATCAA AACAGCACTA TTTGTTTACG TAATGCACCG
CAAGCGGGCG AAACATTTGG CTCAATTGAC GTAATCAAGT CAGCATTTGT CAATATTGGC
TCACAAGAAG TACAAGGTAT CGATTTATCT AGCCATTACG GTCTTGAGTT AAACAGCTAT
GGTGATATTA AGTTTGGTCT AGAGTACAGC TACTTAATCA GCTTTGAAAA AGAAGTTGAT
GGAACAACGA TTGACTACAC CGGTGAGTAC GAGTATCCAC AACACCGTTG GTTGGCAACA
ACCAACTGGA ACATGGACGA CTTTACGGCT AACGTTAACT TAAGCTATAT AGGTGAGTTT
GAAGACTACA ACAAAACTCG TACTGTTGAT GCACAGTTGT TAGTTGATAT GTCTGGTTCA
TATCGTTTCA ACGATACTGT TAAGTTATCT GTAGGTGTAA ATAACGTGTT TGATGAAGAG
CCATCATTTG CGATTGGTGA TGGCGATGCT GACCTTTATG GTTACGCAAT GGGCGTACAT
AACCCACTAG GCCGTTATAT TTATACTAAA GTCACAATGA AGTTCTAA
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| Protein sequence | MKKTNLLRSA CAIAVSLSLA PIAFVSQAAE AGAQSKVERI EVTGSRIKRT DIEGPSPVQS
LNKDDIANMG FDNLQQLLER MPANGSGAFS TRGNSQDSTA NGGASISLRG LGPDATLVLI
NGRRVGSSAF AEGISNSFVD INNIPVSAIE RIDILKDGAS AIYGSDAIAG VVNIILRKDI
EGLEINLGYG DDSGTGYDET TASLVWGVKA DKGSASVILD YFTNGTLSAS DMGRFGTANQ
SPYGGEDYRS SRGFPGYFYV NGVKTIDPDC PAENATASGS CLFDYGPYNL TIPTSERVGA
IGQFDYMLGE DLTAFLELSV QHNTSEAGGA PTPLDEDAGL TVPGSHPNNP FGQDIDIGRY
RTVDAGARRW DIESDTMRIV AGLRGVINDW DWEVSAQRGR SESTQTGDRS QGWVRTDYLQ
AEIDAGNYNP FGGTMNSQDV IDRITTSLVR QGKSSITAYD ASISGHAFTI ADRDIMMAAG
AEYREESVSD IPDEQFQRGL IFGTEAVSAF GSRDQHAAYV ELSIPIADNF ELQLAGRYDS
YSDFGSTTNP KIAFQWGISD EITARGSWST GFRAPSLAQI GLGPSEKSDF LTDSYRCAAD
NVDCELLDYN FIFAGNPNLK AEESETWNVG MIWAPSQQFD IGFDLYNILQ DHKIDSLQNQ
DLYDENCNDQ NSTICLRNAP QAGETFGSID VIKSAFVNIG SQEVQGIDLS SHYGLELNSY
GDIKFGLEYS YLISFEKEVD GTTIDYTGEY EYPQHRWLAT TNWNMDDFTA NVNLSYIGEF
EDYNKTRTVD AQLLVDMSGS YRFNDTVKLS VGVNNVFDEE PSFAIGDGDA DLYGYAMGVH
NPLGRYIYTK VTMKF
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