Gene Sfri_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0786 
Symbol 
ID4278703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp922292 
End bp922993 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content42% 
IMG OID638133554 
Producthypothetical protein 
Protein accessionYP_749479 
Protein GI114561966 
COG category[S] Function unknown 
COG ID[COG3110] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCAC ACACTATGCG TCATATCATC GCGTTACTTT GTCTTACTCT TAGCCCTATG 
GGCATCGCCG CCAGTTTACA ACTGCCAGAC AGAGCCGAAA CGGTATTAGT TAATGGTAAA 
GCCTCACAAC AGCAATCTAG TGTAAAACTG GACTTAAGCA TGCCCGATAA CATGCAACAA 
ATCGCTTTTC GCTATCAAGC CCGTTACCGA GATAATGGCA GCCAAAATGA TTTTGTTTCT 
GATGTTGTTA TTTTGCGTTT TCAGGCCAGC GAGCAAAACT ATCAACTCAC TTTGCCGACC 
ATTAACTCTG CCTCACGCGC CAATCAATTT AATGATCAAC CCACTATAAC GTTAACCGAC 
AATACGGGTA AAAGCATTGT ATTTACTCAA GATAAGCTGA TGAAGTCAGG CTTACAAATT 
GGCCGTAATT TTGCTCAAGA AATCGCGCTA TATAATGAAT CTGGTGCCAT AGCTGCAATT 
GTATCAGCTA AACGTATCAC CTCAAAAACA ACTACTGCTG CACCAGTAGC ACTAGTGCCA 
GTCGCAAAAA CGACTGAGGT TACAGCAAGT AACAATACCG CCGACACTCA GGTTAATAAA 
ACTGAAGATA TCACCCAAGC AGAAGTCAGT AGAATGCTCG ATTATTGGTA TCAAAAAGCC 
AATCCTAATA CCCAAGCAGA GTTTAAAGCC AAAATAAATT GA
 
Protein sequence
MEPHTMRHII ALLCLTLSPM GIAASLQLPD RAETVLVNGK ASQQQSSVKL DLSMPDNMQQ 
IAFRYQARYR DNGSQNDFVS DVVILRFQAS EQNYQLTLPT INSASRANQF NDQPTITLTD 
NTGKSIVFTQ DKLMKSGLQI GRNFAQEIAL YNESGAIAAI VSAKRITSKT TTAAPVALVP 
VAKTTEVTAS NNTADTQVNK TEDITQAEVS RMLDYWYQKA NPNTQAEFKA KIN