Gene Sfri_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0055 
Symbol 
ID4277650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp69153 
End bp69818 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content41% 
IMG OID638132796 
Productcytoplasmic chaperone TorD family protein 
Protein accessionYP_748756 
Protein GI114561243 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAA CAGGAAGACA AGTAAGTGAG AATGATCAGT TAAGAGCCGA TATATATCAG 
TTGCTGGCTG CGTTATTTCG TCGCCAACCC AATACTGAGT TATTACAGTT TTTAGCTGGT 
TTAGAGGTAG AGGCCGAGGA TGGCAATACC ATGAGTCAAG CATGGAATGC GTTAAAACTT 
GCGGCAGAAA ATAGTGATAC CAACACCCTA GAAGATGAAT ACTTTGCCAT TTTCTTAGGC 
GTAGGCAGTG GTGAGATTAT GCCTTATGGC AGCTGGTTTA TGACTGGCTC TTTAATGGAT 
AAACCCTTAG CTGCATTGCG GAGTGACTTG ATGTTACTAG GCTTTGAACG TGAAGAGAAT 
GTTAAAGAAC CAGAAGACCA TGTTGCTGCA TTATGCGAAG TCATGGGCTG TTTAATTTTA 
GAAGCGCCAG GTTACCGTCA GTTAGCGTTT TATCAACGTC ATATTGGCAG TTGGATTATA 
CGTTTTTGCG ATAATTTGGC TAAAACACCT AGTGCTAATT TTTACCTAAA CGTCGCGCAA 
TTAGCTAAAG CGTTTTTTAC CGCTGAAGCC AATGAATTTG AACAACTGAG TTTGGATATT 
CCGGTGAATT GTCCAGGTAG TGCTGACTTA GATCCGCTTG AAGAAGAGGT TGTACAAATT 
AACTAA
 
Protein sequence
MTETGRQVSE NDQLRADIYQ LLAALFRRQP NTELLQFLAG LEVEAEDGNT MSQAWNALKL 
AAENSDTNTL EDEYFAIFLG VGSGEIMPYG SWFMTGSLMD KPLAALRSDL MLLGFEREEN 
VKEPEDHVAA LCEVMGCLIL EAPGYRQLAF YQRHIGSWII RFCDNLAKTP SANFYLNVAQ 
LAKAFFTAEA NEFEQLSLDI PVNCPGSADL DPLEEEVVQI N