Gene SeSA_A4088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4088 
SymbolasnC 
ID6518629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3960710 
End bp3961168 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content49% 
IMG OID642749057 
ProductDNA-binding transcriptional regulator AsnC 
Protein accessionYP_002116819 
Protein GI194737018 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0112845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATT ATCAGATCGA CAATCTGGAC CGCGGCATAC TTGACGCCTT AATGGAAAAT 
GCCCGCACTG CCTACGCCGA ACTGGCCAAA CAATTTGGCG TTAGCCCTGG AACCATTCAC 
GTTCGCGTCG AGAAAATGAA GCAGGCCGGG ATTATTACTG GCGCACGGAT TGACGTCAGC 
CCCAAACAGC TGGGCTACGA TGTGGGCTGC TTTATTGGCA TCATTCTCAA AAGCGCCAAA 
GACTATCCCT CCGCACTGGC CCGGCTGGAA AGCCTGGATG AAGTGACGGA AGCGTATTAC 
ACCACCGGTC ACTACAGCAT CTTTATAAAA GTAATGTGTA AATCAATCGA CGCGCTTCAG 
CACGTACTTA TCAACAAGAT CCAAACAATT GATGAAATTC AGTCCACTGA GACACTGATC 
GTCTTGCAGA ACCCGATCAT GCGCACCATC AAGCCATGA
 
Protein sequence
MENYQIDNLD RGILDALMEN ARTAYAELAK QFGVSPGTIH VRVEKMKQAG IITGARIDVS 
PKQLGYDVGC FIGIILKSAK DYPSALARLE SLDEVTEAYY TTGHYSIFIK VMCKSIDALQ 
HVLINKIQTI DEIQSTETLI VLQNPIMRTI KP