Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2253 |
Symbol | |
ID | 6519230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 2134638 |
End bp | 2136566 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642747322 |
Product | tail protein |
Protein accession | YP_002115115 |
Protein GI | 194738380 |
COG category | [S] Function unknown |
COG ID | [COG5283] Phage-related tail protein |
TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.725805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.182579 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACA GTTTCCAGTT AAAGGCCATT ATCACTGCCG TTGACCAGTT ATCGGGTCCG CTGAAAGGGA TGCAGCGGGA ACTGAAGGGA TTTCAGAAAG AAATGGCCGG GCTGGCGATC GGTGCTGCCG CTGCCGGGAC CGCTGTTCTT GGGGCGCTGG TGCTGCCCGT GAATGCTGCG ATTGGCTTTG AGTCAAAAAT GGCTGACATC CGGAAGGTGG TTGACGGCCT GGATGATAAA AAAGCATTCG CGCAGATGAG TGACGATATC CTGACGCTGT CCACACAGTT ACCGATGGCG GCGGAGGGAA TTGCAGAGAT CGTGGCGGCG GGCGGGCAGG CAGGCATTGC CCGCGGCGAT TTGATGCAGT TTGCGAACGA CGCAGTGAAA ATGGGTGTGG CGTTTGATAC CACTGCCGAA GAGTCCGGTC AGATGATGGC GCAGTGGCGG ACAGCGTTCA AACTGACGCA GGAAGACGTG GTTGTCCTGG CCGATAAAAT CAACTATCTG GGGAATACCG GCCCGGCAAA TGCGAAGAAG ATTTCTGATA TCGTGACGCG GATTGGTCCG CTTGGCGGTG TTGCCGGAGT GGCATCCGGC GAAATTGCCG CGATGGGCGC CACCATTGCC GGGATGGGGG TTGAATCAGA AATTGCCTCA ACCGGCATTA AAAACTTCAT GCTGTCGCTT ACGGCGGGTA AATCCGCAAC TAAGTCTCAG AAAGAAGCCT TAAGAGCGCT GCGGATAAGC CCCACTAAAT TAGCTGCTGA AATGCAAAAA GACTCTAAAA CCGCGATCCT CAAGGTTTTA GATTCTCTTT CAAAATTGTC AGCGACTGAC AGGCCACAAA TACTGACCAG GCTTTTCGGT AAAGAGTCGA TAGGGGCTAT CGCACCGCTG CTGACCAACA TGGATCTGTT ACGCACCAAC TTTGAGCGTG TGACAGATGC CCAGGAATAT GGCGGCTCGA TGCAGAAGGA ATACGCATCC CGCGCGGCCA CAACAGAAAA CCAGCTGGTT CTGCTGAAAA ACAGCGTCAA TGCGATTTCG GTAACGCTGG GCGATACCTT CCTGCCCGCC ATTAACGAAG CCGCAGAAGC GGTCATGCCT TACCTGGAGC AGCTCCGGAC ATTCGTTCGC GCGAATCCTG AACTGGTTCA GTCTGCTGCG AAGTTCGGCG CGGCGCTGCT GGCTGTTGGC GTATCCATCG GTAGCCTGTC CCGGGCTGTC AAAATCCTGA ACAGTGTCAT TAATCTCTCT CCGGCGAAAG TCGCCATTGC GGCGCTGGTG GCCGGCGCTA TGCTGATCAT TGAGAACTGG GACGATGTTG CTCCGGTGAT TAAGGCGGTA TGGCAGGAGG TCGATAACGT TGCGCAGGAG ATGGGCGGAT GGGAGACGGT GATTGAAGGG GTTGGTCTGG TTATGGCTGG TTCTTTTACC GTCAGGACCA TTGGTGCCCT GCAGCAGTCC GTCCTGCTGG CCGGACGGCT TTCCGGTCTG CTGGGTAAAA TTGGCCGGAT GGGGGCCATG ACGCTGACAA TTGGCGTGGC GGTGTCACTC TTTAAAGAGC TTAAGGATCT GGAGCAGGGG GCGAAGGATG CGGGTATGGA TGCTGGCGCA TTCGCTGTAC AGAAGCTGCA AACGAAGGAG CGTGAACGCG GGTATAACGG TTTTATTCCC AGACTCAAAG AGCTTCTTGG TATGGACACC CCGATTCCGC AGGGGCGTTA TCAACCTTAT GTGCCACTGA CCCGGCGTTC TGGCGTACTC GAGCGAGCTG TCCCGCCATC AACGCAGCGC AGCGAACTCA AAGTGACATT TGAGAATGCA CCACAAGGTA TGCGTGTGAC TGATATACCG AAATCCGGTA ATCCATTGAT GAACATCAGC CATGATGTGG GTTACTCACC CTTTCGTACA TCACGATAA
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Protein sequence | MADSFQLKAI ITAVDQLSGP LKGMQRELKG FQKEMAGLAI GAAAAGTAVL GALVLPVNAA IGFESKMADI RKVVDGLDDK KAFAQMSDDI LTLSTQLPMA AEGIAEIVAA GGQAGIARGD LMQFANDAVK MGVAFDTTAE ESGQMMAQWR TAFKLTQEDV VVLADKINYL GNTGPANAKK ISDIVTRIGP LGGVAGVASG EIAAMGATIA GMGVESEIAS TGIKNFMLSL TAGKSATKSQ KEALRALRIS PTKLAAEMQK DSKTAILKVL DSLSKLSATD RPQILTRLFG KESIGAIAPL LTNMDLLRTN FERVTDAQEY GGSMQKEYAS RAATTENQLV LLKNSVNAIS VTLGDTFLPA INEAAEAVMP YLEQLRTFVR ANPELVQSAA KFGAALLAVG VSIGSLSRAV KILNSVINLS PAKVAIAALV AGAMLIIENW DDVAPVIKAV WQEVDNVAQE MGGWETVIEG VGLVMAGSFT VRTIGALQQS VLLAGRLSGL LGKIGRMGAM TLTIGVAVSL FKELKDLEQG AKDAGMDAGA FAVQKLQTKE RERGYNGFIP RLKELLGMDT PIPQGRYQPY VPLTRRSGVL ERAVPPSTQR SELKVTFENA PQGMRVTDIP KSGNPLMNIS HDVGYSPFRT SR
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