Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1571 |
Symbol | |
ID | 6519492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 1515270 |
End bp | 1516970 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642746683 |
Product | putative amidohydrolase family |
Protein accession | YP_002114486 |
Protein GI | 194737712 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0884579 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGTC TCGTCCCGTC TCTGATTTCC AGAACCGCGC TTCTCTTTCT GCTCACGGCC ACAGGCGCAG CCACCGCCGC CCGCCCGGCA GCGGATATTA TTTTGCATAA CGGTAATATC ATCACTCTGA ATGATGCCCA GCCGCAGGCC AGCGCGCTGG CGATTTCCGG CTCGCGGATT GTGGCGATTG GCGGTGATAC GGCGACAAAT GAATGGCGCG GCGACCATAC CCGTACCATC GATTTACAGG GTAAAACCGT GATACCCGGC CTGACCGATA CCCACATTCA CGCCATTCGC GGCGGACAAA CCTGGACATT CGAAACCTAC TGGTACAACA GCCCTTCGCT TAAAGACGCG CTGGATAAAT TACGCGCCGA CGCTAACCGT CGTCCCCGCG ATCAATGGGT AGCCGTAGTG GGATCGTGGA TACCGGCACA ATTTGCAGAA AACCGGGCGC CGACGGTAGC CGAACTGAGC CACGCCCTTC CCGATCATCC GGCTTATATT CAGTATCTTT ACGACTATGC GTTAGTGAAT CAGCGCGGTA TAGACGTACT TGGCCTTAAC GACACCCCTC CTCCTGATTT AGCGGGAATC CGCGTAGAGC GCGACACAAA AGGTAGCGCC ACGGGGAAAT TATTTGGTGA CATCGCCGCG TTTAACCAGC TTTTTGCCAG CATAAGTAGT AACGCCGATC GCGAGGGCGG TCTGCGACAA TTTTTCGCTG ATATGAACGC TCGCGGCGTG ACCGGCATCA TTGACCCCTC TGCCGGGCCT GCCGCCGCTT ATGAGCCTTT ATTTGCAATG CGAAACCAGG GGGATTTACC GCTGCGCGTG GGGTATCGCA TTCCGGTACA GCCGGAAGCG AAAGGTCATG AAGCGCAGTG GTTCAGCAAC CTGATGGCCT TTCGCCCGGC GCGTGCCGAT GACGGACAAC TGGCTTTTCT TGGCCTGGGG GAAAGCCTGG TGGCCGGAAT GAATGACGGC GTGCGGATGG CCCCAGGATT TTCTTCCTCA GAGCAGGATA AAACCGCGCT TCGCCAGGTC GCGACGTTTG CGGCAAAACG GGGAATACCG CTTGAGATCC ACGCCTATAC CGATGACAGC GCCGACGCGA TATTGACGAT TTTTGAGCAG GTAGCGCAGC AGTACGATCT GCGTCCTCTC CGCTGGTCTA TTGCGCATCT GAATACCGGT TCGCCACAGA CGCTTGAGCG AATGCGTAAG CTGGGCCTGG CATACACTGT GCAAATGGGG CCTTACTTTG AGGGGCTTGC CATCCGTGAC GCCAATCCAC CCGGCGCGAC GGACAATTCG CCGCCGGTTC GACTGGCGCT GGATAAAGGG CTTGTCGTAG CTGGCGGTAC CGATTCGACG CGTATTGGCA TTGCCGGTGT CTGGCACGCT ATCGAATATC ATATCACCGG TATAGCGTCA GGCGGTTCCG TACGTAAACC CGCCAGCGAG CGGCTCACGC GTCTGGAAGC GCTAGCGTTA TATACACGTC ATGCCGCCTG GCTCGCCTTT GCCGAACAAC ACCGGGGCCA GCTTAGCGTC GGAAAACAGG CCGATCTGGC GGTACTCAAT CAGCCATTTA TGACGATGCC CGAAGACAGA ATTGATACCA TTCGCGCTGT TTTGACGCTT GTCGATGGAC GCATTGTTCA CGAAAGTCCG GACCTTAACG CCGGACAATG A
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Protein sequence | MISLVPSLIS RTALLFLLTA TGAATAARPA ADIILHNGNI ITLNDAQPQA SALAISGSRI VAIGGDTATN EWRGDHTRTI DLQGKTVIPG LTDTHIHAIR GGQTWTFETY WYNSPSLKDA LDKLRADANR RPRDQWVAVV GSWIPAQFAE NRAPTVAELS HALPDHPAYI QYLYDYALVN QRGIDVLGLN DTPPPDLAGI RVERDTKGSA TGKLFGDIAA FNQLFASISS NADREGGLRQ FFADMNARGV TGIIDPSAGP AAAYEPLFAM RNQGDLPLRV GYRIPVQPEA KGHEAQWFSN LMAFRPARAD DGQLAFLGLG ESLVAGMNDG VRMAPGFSSS EQDKTALRQV ATFAAKRGIP LEIHAYTDDS ADAILTIFEQ VAQQYDLRPL RWSIAHLNTG SPQTLERMRK LGLAYTVQMG PYFEGLAIRD ANPPGATDNS PPVRLALDKG LVVAGGTDST RIGIAGVWHA IEYHITGIAS GGSVRKPASE RLTRLEALAL YTRHAAWLAF AEQHRGQLSV GKQADLAVLN QPFMTMPEDR IDTIRAVLTL VDGRIVHESP DLNAGQ
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