Gene SeSA_A1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1013 
Symbol 
ID6518623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp987080 
End bp987760 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content54% 
IMG OID642746143 
Productputative dehydrogenase 
Protein accessionYP_002113954 
Protein GI194735646 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0912501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.777049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAG TCGATGTGAA ATGCCCGTTT TGCGCGCAAA CGGCATCCGT TAAAAAGTAT 
GGTCCGGGGA GTGCAGGGCA CCAGCATTAC CGCTGTCAGG CATGTTGCCG CAGCTTTCAG 
GTCGACTATG AATACCGCGC CTGTCAGCCC GGCATGAAAG GGCAGGTTGT TGATCTTGCC 
ATGTACAATG CCGGTATTCG TAATCCGCAG GGGCTGGCCA TCAATCCCTG GAGCGGCGCG 
CTATGGCTGC ATGAACACGG TCCGCGCGGC GGCGATGAAA TTAACATCCC GGAAAAAGGC 
AAAAATTATG GCTGGCCGCT GGCCACATGG GGCGTCAACT ATAGTGGTCT AAAAGTGCCG 
GAAGCCAAAG GTGAAATTGT CGAAGGAACG GAGCAACCGG TTTACTACTT GAAGGATTCT 
CCGGCGATCA GCGGGATGGC TTTTTATGCC AGCGACGTTT TTGCGCCGTG GCGGCACAAA 
CTGTTTATCG GCGCGCTAAA AGATAAAGAG GTCATTGTGA TGCGCGTCGA TGGCAATACG 
GTGACGGAAG AAGGCCGTAT TCTGGGTGAC AGAAAGCAGC GTATTCGGGA TGTGCGTGTC 
GGACCTGACG GCTACTTATA TGTGTTAACC GATGAGTCCG ACGGGCAGTT ACTCAAGGTA 
AGTCCTGCAG CCACGCGTTA G
 
Protein sequence
MAKVDVKCPF CAQTASVKKY GPGSAGHQHY RCQACCRSFQ VDYEYRACQP GMKGQVVDLA 
MYNAGIRNPQ GLAINPWSGA LWLHEHGPRG GDEINIPEKG KNYGWPLATW GVNYSGLKVP 
EAKGEIVEGT EQPVYYLKDS PAISGMAFYA SDVFAPWRHK LFIGALKDKE VIVMRVDGNT 
VTEEGRILGD RKQRIRDVRV GPDGYLYVLT DESDGQLLKV SPAATR