Gene SeHA_C4879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4879 
Symbol 
ID6487783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp4747405 
End bp4748592 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content44% 
IMG OID642744925 
Producthypothetical protein 
Protein accessionYP_002048498 
Protein GI194447752 
COG category[S] Function unknown 
COG ID[COG4269] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.868148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACG TTATCAGTAG TAAAGATAAC CATAATCACA CGTTGGTGTT TACAGGCAAG 
GGCGGAAAGT ATTTTGTTAT TTGCCTTGTG AATTTCTTGT TGACGTGTAT CACGTTGGGA 
ATCTATGCGC CGTGGGCGAT GGTGAAATGT CGACGTTATA TTTATACTAA TATGACGCTA 
AACAATCAGC CTTTTGCTTA CAAAGCCACG GGCGGCGCAT TATTTATTAG TGTGTTGTTA 
GTTTTTATTA TTTATATTGT TAGCCTCTCT CTTATTGAAC ACGGTCATCC CGGTCTCGGT 
TTTACGCTAT TCGGCTTATT AATTGCGATT ATTCCTTTTA TGGCGGTGAA AGGATTACAG 
TATCAGGCGA TGATGACTTC GCTTAATGGC GTACATTTTG GATTCCAGTG TTCCATGCGG 
CGCGCCTGGT GGTACATGTT CGCTCTTCCT GTACTCCTGA TGGTGGCGCT TTATATTGTT 
CTTTATATTA TCTCACTGGT AACCATCGCC GTCGGCGGTT TAGTGTTCAG TATCGTTTTT 
CTCGGTTTGC TGGCTATTAT TGGGATAGGG GTCATTAACG GTATTACCTA CAGCAAATGG 
ATGACCTTGT TTGGTAATGG CGCAAACTTT GGCATTCATC GTTTCTCGAT TCAGGTTAAT 
GTTAAAACGT GCATCAGAGG GTGCGTGTTG GCAATGTTGA CCCTTTTCCC TTTTGCTGTC 
GTGATTGGTT ATCTAATCGC GCCGGTGTTC ACCGACATGA TTCTTTTGAG TATGATGGGG 
AATGCGCAGG CAGGAGGGGC GCTTATTCTG CAATATTATG GCCAGATAAT GGTATGTTAT 
TTCCTCTATT TTCTCGCGAT TATTGTGGTA ACCAGTTACT TATATGTGGC GTTACGCAAC 
CTGTTTTTAA ACAATTTGTC ACTGGCGAAC GATTCGATTC GTTTTCATTC CTCTGTCACT 
GCACACGGTA TGCTGTGGCG GTTACTGGTG GTGTTTGTGA TTTCCGGCGT GACCTTAGGG 
CTGGCTTATC CGTGGTTGAA AATTTGGCTG GTGAGCTGGC TGGCGCAGAA TACACAGGTC 
CAGGGCGATC TGGATTCGCT TGAGTTAACC AATGATGAGA AGCCGCTGGA AAACAGCCCG 
CTAATGTGGA TTTCTCGTGG CATTATGCCT TACTTCCCGT TTATCTGA
 
Protein sequence
MNNVISSKDN HNHTLVFTGK GGKYFVICLV NFLLTCITLG IYAPWAMVKC RRYIYTNMTL 
NNQPFAYKAT GGALFISVLL VFIIYIVSLS LIEHGHPGLG FTLFGLLIAI IPFMAVKGLQ 
YQAMMTSLNG VHFGFQCSMR RAWWYMFALP VLLMVALYIV LYIISLVTIA VGGLVFSIVF 
LGLLAIIGIG VINGITYSKW MTLFGNGANF GIHRFSIQVN VKTCIRGCVL AMLTLFPFAV 
VIGYLIAPVF TDMILLSMMG NAQAGGALIL QYYGQIMVCY FLYFLAIIVV TSYLYVALRN 
LFLNNLSLAN DSIRFHSSVT AHGMLWRLLV VFVISGVTLG LAYPWLKIWL VSWLAQNTQV 
QGDLDSLELT NDEKPLENSP LMWISRGIMP YFPFI