Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1576 |
Symbol | |
ID | 6488576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 1523686 |
End bp | 1524297 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642741799 |
Product | transposase |
Protein accession | YP_002045444 |
Protein GI | 194449906 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0122395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 89 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAACAGT GCCTGCAAGC CTACCCGACG TTGCGCCCGC TGATCGGCGG CACCCTGAAC ATCAAGCACG TGCGTGCCCA CTGGGACGAC ATCCTGCGCC TGGCCAGCTC GATCAAGCAG GGCACCGTCA CCGCCTCGCT GATGCTGCGC AAGCTCGGCA GCTACCCGCG CCAGAACGGA CTGGCCGTGG CCCTGCGCGA GCTGGGCCGG ATCGAGCGCA CGCTGTTCAT CCTGGACTGG CTGCAAAGTG TTGAACTGCG CCGCCGCGTG CATGCCGGCC TGAACAAAGG TGAGGCGCGC AACTCGCTGG CCAGGGCGGT GTTCTTCAAC CGCCTTGGGG AAATCAGGGA TCGGAGCTTC GAGCAGCAGC GCTACCGGGC CAGCGGCCTC AACCTGGTGA CGGCGGCTAT CGTGCTGTGG AACACGGTGT ACCTGGAACG CGCCACCCAG GGGTTGGTCG AGGCCGGCAA GCCGGTGGAC GGCGAGCTGC TGCAATTCCT GTCGCCGCTG GGCTGGGAGC ACATCAACCT AACCGGCGAT TACGTCTGGC GGCAGAGCCG CAGACTGGAA GACGGGAAGT TTCGGCCCTT ACGGATGCCC GGAAAACCTT AG
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Protein sequence | MQQCLQAYPT LRPLIGGTLN IKHVRAHWDD ILRLASSIKQ GTVTASLMLR KLGSYPRQNG LAVALRELGR IERTLFILDW LQSVELRRRV HAGLNKGEAR NSLARAVFFN RLGEIRDRSF EQQRYRASGL NLVTAAIVLW NTVYLERATQ GLVEAGKPVD GELLQFLSPL GWEHINLTGD YVWRQSRRLE DGKFRPLRMP GKP
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