Gene SeHA_C1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1576 
Symbol 
ID6488576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1523686 
End bp1524297 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content66% 
IMG OID642741799 
Producttransposase 
Protein accessionYP_002045444 
Protein GI194449906 
COG category[L] Replication, recombination and repair 
COG ID[COG4644] Transposase and inactivated derivatives, TnpA family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0122395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAACAGT GCCTGCAAGC CTACCCGACG TTGCGCCCGC TGATCGGCGG CACCCTGAAC 
ATCAAGCACG TGCGTGCCCA CTGGGACGAC ATCCTGCGCC TGGCCAGCTC GATCAAGCAG
GGCACCGTCA CCGCCTCGCT GATGCTGCGC AAGCTCGGCA GCTACCCGCG CCAGAACGGA
CTGGCCGTGG CCCTGCGCGA GCTGGGCCGG ATCGAGCGCA CGCTGTTCAT CCTGGACTGG
CTGCAAAGTG TTGAACTGCG CCGCCGCGTG CATGCCGGCC TGAACAAAGG TGAGGCGCGC
AACTCGCTGG CCAGGGCGGT GTTCTTCAAC CGCCTTGGGG AAATCAGGGA TCGGAGCTTC
GAGCAGCAGC GCTACCGGGC CAGCGGCCTC AACCTGGTGA CGGCGGCTAT CGTGCTGTGG
AACACGGTGT ACCTGGAACG CGCCACCCAG GGGTTGGTCG AGGCCGGCAA GCCGGTGGAC
GGCGAGCTGC TGCAATTCCT GTCGCCGCTG GGCTGGGAGC ACATCAACCT AACCGGCGAT
TACGTCTGGC GGCAGAGCCG CAGACTGGAA GACGGGAAGT TTCGGCCCTT ACGGATGCCC
GGAAAACCTT AG
 
Protein sequence
MQQCLQAYPT LRPLIGGTLN IKHVRAHWDD ILRLASSIKQ GTVTASLMLR KLGSYPRQNG 
LAVALRELGR IERTLFILDW LQSVELRRRV HAGLNKGEAR NSLARAVFFN RLGEIRDRSF
EQQRYRASGL NLVTAAIVLW NTVYLERATQ GLVEAGKPVD GELLQFLSPL GWEHINLTGD
YVWRQSRRLE DGKFRPLRMP GKP