Gene SeD_B0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0014 
Symbol 
ID6870925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand
Start bp8453 
End bp9421 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content54% 
IMG OID642783167 
Producttype II secretion system protein 
Protein accessionYP_002213861 
Protein GI198241704 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3267] Type II secretory pathway, component ExeA (predicted ATPase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.368313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones107 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTTG AAGTGATGGA GCATTATGGA CTGACGCAGT CTATTGAACA GGCCGGGTAT 
TATGAAACTG CCCACCATAA GCAGCTGATG AAAGACATTA AGGGTGCGAT ACGCGAAGGA
CGACTGATAG CGGTCTGTGG CGTGGTGGGA AGCGGTAAAA CCGTCACTCT GCGACGCCTG
CAGCAGCAAC TGCTGGATGA AAATAAAATC ATTGTCGCCC GCTCCCTGTC GGTGGACAAA
CAGAGTGTCC GGCTCGCCAC GCTGATTAAT GCCCTGTTTT ATGACCTGGC ACAGGATAAA
CAGGTGCAGA TCCACAAACA AGGTGAACGC CGCGAGCGTG AGCTGCAGGA ACTGGTCAAA
AAAGGCAAAC GCCCGGTGGC GCTGTTTGTT GATGAAGCCC ATGACCTGAA CGGTAATACA
CTAACGGGGC TCAAACGGCT GATGGAAGTG GTTGAAGACG GCGGTGGTAG GCTGTCCGTC
GTTCTGGCCG GTCACCCAAA ACTGCGTAAT GACCTGCGTC GTCCGACGAT GGAGGAAATT
GGCTATCGTA CCGATATTTT TACACTGGAC GGGATCACCG GCAGTCAGCG TGAATATATC
CAGTGGCTGC TGAAGACCAG CACCGGTAAG GGTAAGCCGG AAGATATTCT AACGACCGAA
GCCGTTGACC TGCTGGCGAT GAAACTGCGA ACACCGCTGC AGGTCCAGTT GCACCTGACG
CTGGCGATGG AAGCAGGATA CCAGACGGGC GAAAAACCGA TTACTGCCAC TCTGGTTGAA
TCCGTGCTGT CACGTCAGCT GGATGACCTG GAGCCGACGC TCACGCGACA TGGTTACCGG
CTGAAGGATA TGGTGGAGCA GTTCGATGCA AAACCAGCTG AAATCAGGGC ATTATTTAAT
AATCAGTTAG ACCCTGCCCG CACGGCCGAA CTACGCGACA GAATGCTGGC GGTCGGTCTG
CCAATATGA
 
Protein sequence
MRVEVMEHYG LTQSIEQAGY YETAHHKQLM KDIKGAIREG RLIAVCGVVG SGKTVTLRRL 
QQQLLDENKI IVARSLSVDK QSVRLATLIN ALFYDLAQDK QVQIHKQGER RERELQELVK
KGKRPVALFV DEAHDLNGNT LTGLKRLMEV VEDGGGRLSV VLAGHPKLRN DLRRPTMEEI
GYRTDIFTLD GITGSQREYI QWLLKTSTGK GKPEDILTTE AVDLLAMKLR TPLQVQLHLT
LAMEAGYQTG EKPITATLVE SVLSRQLDDL EPTLTRHGYR LKDMVEQFDA KPAEIRALFN
NQLDPARTAE LRDRMLAVGL PI