Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_B0014 |
Symbol | |
ID | 6870925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011204 |
Strand | + |
Start bp | 8453 |
End bp | 9421 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642783167 |
Product | type II secretion system protein |
Protein accession | YP_002213861 |
Protein GI | 198241704 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.368313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 107 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGTTG AAGTGATGGA GCATTATGGA CTGACGCAGT CTATTGAACA GGCCGGGTAT TATGAAACTG CCCACCATAA GCAGCTGATG AAAGACATTA AGGGTGCGAT ACGCGAAGGA CGACTGATAG CGGTCTGTGG CGTGGTGGGA AGCGGTAAAA CCGTCACTCT GCGACGCCTG CAGCAGCAAC TGCTGGATGA AAATAAAATC ATTGTCGCCC GCTCCCTGTC GGTGGACAAA CAGAGTGTCC GGCTCGCCAC GCTGATTAAT GCCCTGTTTT ATGACCTGGC ACAGGATAAA CAGGTGCAGA TCCACAAACA AGGTGAACGC CGCGAGCGTG AGCTGCAGGA ACTGGTCAAA AAAGGCAAAC GCCCGGTGGC GCTGTTTGTT GATGAAGCCC ATGACCTGAA CGGTAATACA CTAACGGGGC TCAAACGGCT GATGGAAGTG GTTGAAGACG GCGGTGGTAG GCTGTCCGTC GTTCTGGCCG GTCACCCAAA ACTGCGTAAT GACCTGCGTC GTCCGACGAT GGAGGAAATT GGCTATCGTA CCGATATTTT TACACTGGAC GGGATCACCG GCAGTCAGCG TGAATATATC CAGTGGCTGC TGAAGACCAG CACCGGTAAG GGTAAGCCGG AAGATATTCT AACGACCGAA GCCGTTGACC TGCTGGCGAT GAAACTGCGA ACACCGCTGC AGGTCCAGTT GCACCTGACG CTGGCGATGG AAGCAGGATA CCAGACGGGC GAAAAACCGA TTACTGCCAC TCTGGTTGAA TCCGTGCTGT CACGTCAGCT GGATGACCTG GAGCCGACGC TCACGCGACA TGGTTACCGG CTGAAGGATA TGGTGGAGCA GTTCGATGCA AAACCAGCTG AAATCAGGGC ATTATTTAAT AATCAGTTAG ACCCTGCCCG CACGGCCGAA CTACGCGACA GAATGCTGGC GGTCGGTCTG CCAATATGA
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Protein sequence | MRVEVMEHYG LTQSIEQAGY YETAHHKQLM KDIKGAIREG RLIAVCGVVG SGKTVTLRRL QQQLLDENKI IVARSLSVDK QSVRLATLIN ALFYDLAQDK QVQIHKQGER RERELQELVK KGKRPVALFV DEAHDLNGNT LTGLKRLMEV VEDGGGRLSV VLAGHPKLRN DLRRPTMEEI GYRTDIFTLD GITGSQREYI QWLLKTSTGK GKPEDILTTE AVDLLAMKLR TPLQVQLHLT LAMEAGYQTG EKPITATLVE SVLSRQLDDL EPTLTRHGYR LKDMVEQFDA KPAEIRALFN NQLDPARTAE LRDRMLAVGL PI
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