Gene SeD_A4408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4408 
Symbol 
ID6873469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4257695 
End bp4258537 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content53% 
IMG OID642787328 
Productaldose-1-epimerase family protein 
Protein accessionYP_002217939 
Protein GI198244909 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAGCG GTGGAAAAAC TATTCAGCTT AATGCGGGCC ATTACCAGGC GAAAATCGTC 
ACGGTTGGCG CAGGTCTGGC GGAACTGACT CATCATGGAC GTCATGTGGT CATCCCGCAT
AAACCGGAAG AAATACCCAT GGCGCATCTG GGGAAGGTAT TGATTCCCTG GCCAAATCGC
GTGACAAATG GCTGCTACTC CTATAACGGC AAAGTTTTCC AGCTTGCCGT TAACGACCCG
GTTTCGCAGA CCGCCATTCA CGGTCTGTTA GCCTGGCGAG ACTGGCAGAT TAATTATCAG
TCGGCGACGG AAGCGTCGCT AACGATTTTT CTGCCGCCCT CTTACGGCTA TCCCTTTGCG
TTGATATCGG AAGTGATTTA TCGGTTAGAT GCCGCCAGTG GGCTGCACGT ATTGATTCGT
ACGCAAAACA TTGGCGATGA ATCAGCCCCT TATGGCGCGG GCGCACATCC TTATTTGACT
TGTAACCTGC AAAGCATCGA TAGCTGTGTA TTAACACTGC CGGCAAGCGA AGAATTGCCC
GCAGGCAGAG ATTTTTCCGC ATCATGCCTG CTCGGCGAAA CGCGCCTTGA TCATGCGGTT
AAGACCGCGA CTACCCCGGC TGAGTGGGAG GTCAGACTTA CCAGCCCAAC GCAGAACATG
TCCACATTTT TACGCAGCAC CCAGCCCTGG TTGCAGATCT ATACCGGCGA AAAACTCAGC
CGAAAAGGTC TCGCGGTAGA GCCTATGAGC TGCCCGCCCG ATGCATTTAA TTCCGGGATC
GCACTGATTC ATCTTGCCCC AAAAGCGATC CATCAACTGC ATTTTTCCAT CGGCTGCGAC
TAG
 
Protein sequence
MHSGGKTIQL NAGHYQAKIV TVGAGLAELT HHGRHVVIPH KPEEIPMAHL GKVLIPWPNR 
VTNGCYSYNG KVFQLAVNDP VSQTAIHGLL AWRDWQINYQ SATEASLTIF LPPSYGYPFA
LISEVIYRLD AASGLHVLIR TQNIGDESAP YGAGAHPYLT CNLQSIDSCV LTLPASEELP
AGRDFSASCL LGETRLDHAV KTATTPAEWE VRLTSPTQNM STFLRSTQPW LQIYTGEKLS
RKGLAVEPMS CPPDAFNSGI ALIHLAPKAI HQLHFSIGCD