16 homologs were found in PanDaTox collection
for query gene SeD_A1804 on replicon NC_011205
Organism: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011205  SeD_A1804  putative dehydrogenase protein  100 
 
 		 295 aa  593  1e-168  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0688891  normal  1 
 
 
-
 
NC_011080  SNSL254_A1644  putative dehydrogenase protein  99.32 
 
 		 295 aa  589  1e-167  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.489945  normal  1 
 
 
-
 
NC_011094  SeSA_A1636  putative dehydrogenase protein  98.31 
 
 		 295 aa  584  1e-166  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011149  SeAg_B1639  putative dehydrogenase protein  98.31 
 
 		 295 aa  582  1.0000000000000001e-165  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0272996  n/a   
 
 
-
 
NC_011083  SeHA_C1703  putative ATP/GTP-binding protein  97.63 
 
 		 295 aa  554  1e-157  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.746184  normal  1 
 
 
-
 
NC_010581  Bind_1158  putative hydrogenase expression/formation protein HupK  31.25 
 
 		 329 aa  54.3  0.000002  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.846378  normal  1 
 
 
-
 
NC_007493  RSP_0504  HupK  28.47 
 
 		 270 aa  51.6  0.00002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_2155  HupK  28.82 
 
 		 270 aa  50.8  0.00003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.127907 
 
 
-
 
NC_007908  Rfer_4118  putative hydrogenase expression/formation protein HupK  36.49 
 
 		 391 aa  49.3  0.00007  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_2181  putative hydrogenase expression/formation protein HupK  28.38 
 
 		 329 aa  49.3  0.00008  Xanthobacter autotrophicus Py2  Bacteria  normal  0.124929  normal  0.212664 
 
 
-
 
NC_009440  Msed_0920  coenzyme F420-reducing hydrogenase alpha subunit-like protein  29.86 
 
 		 379 aa  48.5  0.0001  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  1 
 
 
-
 
NC_010627  Bphy_7257  HupK protein  26.4 
 
 		 336 aa  48.9  0.0001  Burkholderia phymatum STM815  Bacteria  normal  0.53403  normal  0.383588 
 
 
-
 
NC_008781  Pnap_1965  hypothetical protein  27.01 
 
 		 390 aa  46.2  0.0006  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.241509  normal  1 
 
 
-
 
NC_008576  Mmc1_2497  Ni,Fe-hydrogenase I large subunit  33.09 
 
 		 379 aa  45.1  0.002  Magnetococcus sp. MC-1  Bacteria  normal  0.633578  normal  0.13514 
 
 
-
 
NC_007958  RPD_1172  coenzyme F420-reducing hydrogenase alpha subunit-like  30.83 
 
 		 370 aa  43.9  0.003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.903456  normal  1 
 
 
-
 
NC_011004  Rpal_1164  hydrogenase expression/formation  28.57 
 
 		 369 aa  42.4  0.009  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0669591  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>