Gene Sden_3520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3520 
Symbol 
ID4020074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4211878 
End bp4212753 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content47% 
IMG OID637957578 
Productcytochrome c oxidase, subunit III 
Protein accessionYP_564518 
Protein GI91794867 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAC ATCAATCCTA TTACGTGCCA GCCCAAAGTG CTTGGCCGAT TATAGGCGCC 
ATAGGGCTGT TTTTAATCGC CTTCGGTGCA GGTAACTATG TACAACAATT ATCCAGTGAA
GCTAGTGGCC CTGGTGGCTA TCTGCTGATA GCAGGACTCG CCATTATTAT CTTTATGATT
TTCGGTTGGT TTAGAACCGT CATTGAAGAG TCCATGTCGG GGCTGTATTC ACCGCAGATG
GACAGATCAT TCAGACAAGG CATGAGCTGG TTTATTTTCT CAGAGATCAT GTTCTTCGGG
GCATTTTTTG GCGCACTCTT CTACGCCAGA ATGCTGTCTG TACCTTGGCT TGGCGGCGCA
TCGAACAACG CCATGACTCA CCAAGTATTA TGGCCGACCT TCGAAGCGAT TTGGCCGCTG
GTCACCACGC CAGATGGCAC TAAAACAGAA GCCATGGGTT GGAATGGTCT GCCGCTTATC
AACACCATCT TACTGCTGAC CTCCTCAGTT ACTCTGCATT TTGCTCACGT GAGTTTAGAG
AAATCTAAAC GCAGTGCTAT CGGTCTGTGG TTAGGGTTAA CCATTATTCT GGGTATCGCC
TTCTTGGTGC TACAGGTAGA AGAATACACC CATGCCTATC AAGAAATGGG GCTGACATTG
GCCTCTGGCA TTTACGGTAA CACCTTCTTC TTACTGACCG GATTCCATGG CATGCACGTC
ACCTTAGGCA CAGTGTTTTT GATTGTGTTG TTTGTGCGGG TATTGAAGGG GCATTTCAGC
CCGGATAAGC ATTTCGCTTT CCAGGCGGGT AGCTGGTATT GGCATTTCGT TGATGTGGTG
TGGTTGTGCT TATTCTTATT TGTTTACGTG CTTTAA
 
Protein sequence
MTKHQSYYVP AQSAWPIIGA IGLFLIAFGA GNYVQQLSSE ASGPGGYLLI AGLAIIIFMI 
FGWFRTVIEE SMSGLYSPQM DRSFRQGMSW FIFSEIMFFG AFFGALFYAR MLSVPWLGGA
SNNAMTHQVL WPTFEAIWPL VTTPDGTKTE AMGWNGLPLI NTILLLTSSV TLHFAHVSLE
KSKRSAIGLW LGLTIILGIA FLVLQVEEYT HAYQEMGLTL ASGIYGNTFF LLTGFHGMHV
TLGTVFLIVL FVRVLKGHFS PDKHFAFQAG SWYWHFVDVV WLCLFLFVYV L