Gene Sden_3493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3493 
Symbol 
ID4020047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp4181705 
End bp4182322 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content49% 
IMG OID637957551 
Producthypothetical protein 
Protein accessionYP_564491 
Protein GI91794840 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTGCC TAACCCAAGT TATCGTTATG CAGCACCCTT CAGAGGTGAG CCAAAGTAAA 
AATACTGTGC ATTTATTGAG TTTGGTATTG CCTGCCATGC GCCGCTATGT GGGGGAATCT 
TCAGCCGATT TTGAGGAATT ACGTCAAGGG CTGGATCTGC AACATTGCTA TTTAGTCTAC 
CCCAGCGATA AGAGCCAGAG TGCCGAGCAA ATCAGCATTG CTCTTGCTAA TGCTAATGAC 
GACGCTGCTT CTAGCAAGTG TGTCAGGGGG AGTCCGGCAA ACAGTGCGCC CCGTACCGCG 
CCCCAAACTC AAACTAAGAT CAGCATCATA TTGCTCGATG GCACGTGGCG AAAAGCCTAC 
CGTATGCTGC AATTAAATCC TTGGCTGCTG GAGCTACCTT CATTACACTT AAATTTTGAG 
GGACAGTCGC AATATCGGAT CCGTAAATCC TCCCGCACTG ACAGCTTATC CACCTTAGAA 
GCAGCGGCCT ATACCATCCA AGCTTTAGAG CCAAATGTAG ATATTGAGCC AATACTTAAG 
TTGTTCGATG CCATGGTGCA GGCAAGACTC GATGCCATGC CGACCCAGGT GAGGGCGCGT 
TATCATGATG ATAAGTAG
 
Protein sequence
MSCLTQVIVM QHPSEVSQSK NTVHLLSLVL PAMRRYVGES SADFEELRQG LDLQHCYLVY 
PSDKSQSAEQ ISIALANAND DAASSKCVRG SPANSAPRTA PQTQTKISII LLDGTWRKAY 
RMLQLNPWLL ELPSLHLNFE GQSQYRIRKS SRTDSLSTLE AAAYTIQALE PNVDIEPILK 
LFDAMVQARL DAMPTQVRAR YHDDK