| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3346 |
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| Symbol | |
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| ID | 4019894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3988391 |
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| End bp | 3989305 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957399 |
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| Product | MSHA biogenesis protein MshM |
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| Protein accession | YP_564345 |
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| Protein GI | 91794694 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.158291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTTGG CGCACTTTGG TTTATCACAA CTGCCTTTTG GCTTAACCCC TAATACTGGA
TTCTTTTTCG GCCTAATCCC CCATGTTGAG GCGCTGCAAG TGTTGCAAGT TGCTCTGGAA
GGGGGCGAAG GCTTTATCAA GGTCACAGGT GAGGTGGGCA CAGGCAAGAC CTTAGTGTGT
CGCAAGTTAC TAAATAGCCT ACCTAAACAG TATCAAAGCG CTTATCTACC CAATCCTTAT
TTGACCCCAG ATGAGCTGCG TTGGGCGCTT GCTTGCGAGT TGGGGCTTAA ATGTCAGACA
GGGTTAGATC AGCGGCAATT AACTCACTGG ATAACCAAGC GTTTATTGGC ATTAAGCCTA
GGTGGGAAAC AAGTGGTCTT GGTGGTGGAT GAAGCCCAAG CACTACCGGA TGAGAGTCTA
GAAGCCCTAC GATTGCTCAC CAATCTGGAG TCTGAGCAAC GTAAACTCAT TCAGCTGGTT
CTTTTTGGTC AGCCAGAGCT TGATGAGCGG CTGCAAACCC ATCAATTTCG TCAGTTAAGG
CAAAGGATTA GCTTTAGTTA TTGCCTGCGG CCATTAATGT GGGATGAAGT TCAAGCTTAC
ATCCAGCACA GATTGGCCGT CGCAGGCTAT CAAGGCGATG CGTTATTTAG TGATAAAGAC
ATTAAAATGC TCACCCAAGC TTCAAGGGGA ATACCAAGAT TGATTAATAT CCTCGCCCAC
AAGTGCTTGC TGTTATGTTA CAGCCAAGGA GAAGCTAAGG TGTTGAGCCG CCATTGTATC
GCAGCGATTG CCGATACTCA GGATGCACAG CTTCTGCCTG AAAGCCCTGT CACTGGTTGG
GGCGTTGGCG TGATACTTGC TCTTTTAATG GTGACGGCTG TCGCTACGGC ACAAACTTGG
GGTTATCTGT TATGA
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| Protein sequence | MYLAHFGLSQ LPFGLTPNTG FFFGLIPHVE ALQVLQVALE GGEGFIKVTG EVGTGKTLVC
RKLLNSLPKQ YQSAYLPNPY LTPDELRWAL ACELGLKCQT GLDQRQLTHW ITKRLLALSL
GGKQVVLVVD EAQALPDESL EALRLLTNLE SEQRKLIQLV LFGQPELDER LQTHQFRQLR
QRISFSYCLR PLMWDEVQAY IQHRLAVAGY QGDALFSDKD IKMLTQASRG IPRLINILAH
KCLLLCYSQG EAKVLSRHCI AAIADTQDAQ LLPESPVTGW GVGVILALLM VTAVATAQTW
GYLL
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