| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3249 |
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| Symbol | |
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| ID | 4019778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3883568 |
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| End bp | 3885571 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957302 |
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| Product | peptidase S14, ClpP |
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| Protein accession | YP_564248 |
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| Protein GI | 91794597 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTAATG AAAAACGCGG CTTTTATAGC ATCAAAGCCG CCGCTGGTGG CGTGGCTGAA
CTCATCATGT ATGGCGATGT TGGCTGGGAT TTTTCAGCTA AACAAATCGC TTCTGATTTA
CGTGCAATGG GCAAGATCAC TCAGCTAAAA GCCTACATTC AATCCGGTGG CGGTGATGTG
ATGGATGGGA TGGCAATTTA TAACATCCTT GCCCGCTGGC CCTGTCAGAA GTCGATTTGC
ATAGAGTCGG TAGCGGCGTC AATGGCCAGC GTGATCTGCA TGGCTTTTGA CACAGTGATC
ATGCCGTCAA ATGCCTTTTT GATGATCCAC AGCAATTGGG GCGGCGCAGT GGGCACGGCA
GACGATTTAC GCGAGTACGC TGATTTACTC GATAAGTGGC GCTCCAGCAT GGGCAAGGCT
TACCAAGATA AGGCAGCGGG GAAACTCAGT GATGAACAGC TGGCACAGTT TTTTAAAGAA
GACACTTGGT TGACCGCCCA AGAAGCGGTT GCTCTTGGGT TGGCTGATGA AGTAATTGAA
CCGATGCAAA TGGCTGCATC AATTGATTTT AAACGATTGA AGGACTTTAA TAATATGCCT
AAAGCAATGC AAACCCTGTT ACAGCAACAG GCCAATGTCG GTGAGACTCC AACTGCAGCC
ACCACAGCCC CAACGACTAC AGCGCCAGCC GCTGCAGTTC CCCCAACTAC CCCCGCAGCT
GTGCAACCTG ATGCCGCAAC AATTCAAGCG GCAGCGATTG CGTTTAATAG TGAGCGAATG
AAGGGTATTA ATACAGCATT TGCTTTCTTT CCGGAGTTAG CTGATTTGCA TAATCAGTGC
ATTGCCGATG CTAATATCAA CGCCGAAAAA GCCAAAGACT TGATCTTGGC TAAATTGGGT
GAGAACACCA CGCCATGCGC TACTTTGCCC CGCACGAGTG TTCACTCGGG TAACGGTAAT
ATAGTGGGCG ATTCGATTCG AGCCCAGCTT TTAACTCGTG CTGGTCATGC GGAGCGAGAG
GAATCAAATG CATATGCTAG TTATAACTTG CGTGATCTTG CCCGTGCTTC ATTAACGGAT
CGTGGTATTG GGGTGTCTGG CATGAACCCT TTGCAAATGG TGGGGTTGGC CTTTACCCAT
AGCTCAAGCG ACTTTGGCAA CATCTTGTTA GATATCGCCA ATAAGTCAGT ATTAATGGGC
TGGGAAACTG CCGAAGAAAC CTTTGAACTC TGGACGAAAA AAGGCCAGCT TGGTGACTTT
AAAATTGCCC AACGGGTAGG GCTAGGTGAC TTCAACAGTT TGCGTCAAGT GCGCGAAGGT
GCCGAATATA AGTACGTGAC AGTTGGTGAT CATGCTCAGC AAATTGCACT GGCCACCTAC
GGCGAACTTT TCTCTATTAC TCGCCAAGCT ATTATCAATG ATGATATGAG TATGTTAACT
GACATTCCAA TGAAAATGGG CTTTGCAGCT AAAGGCACTA TAGGAGATTT GGTGTATGCG
GTTCTTACGC AAAACCCCAA AATGGCAGAC GGAAAAGCCT TGTTCCATGC CGACCACGGT
AACTTAGGTT CTGGTGCGCC CAGCGTAGCG GCTATTGATG CAAATCGCAT GTTAATGCGT
AAGCAAAAAT CGGGTAATCG TAGCCTTAAC ATCCGCCCTG AATTTGTGTT GTGCCCTGTA
GGGCTCGAAA CCACAATGAA CCAGATTATT AAGTCCAGTT CAGTTAAAGG TGCTGATGTT
AATTCAGGTA TTGTTAATCC AATCCAAAAC TTTGCTGAAG TGATTGGCGA ACCTCGTTTA
GATGATAGCA GTGCAACACA ATGGTTCCTT GCAGCTGGCA AAGGGCGTGA CACCATTGAA
GTGGCTTACC TAGACGGTAT CGATACGCCT TACATCGAAC AGCAACAAGG TTTCACCATA
GATGGCGTTG CTACCAAGGT GCGTATTGAT GCGGGTGTTG CACCGCTTGA TCACCGTGGT
TTGGTTAAAT CAACCGGCGT GTAA
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| Protein sequence | MSNEKRGFYS IKAAAGGVAE LIMYGDVGWD FSAKQIASDL RAMGKITQLK AYIQSGGGDV
MDGMAIYNIL ARWPCQKSIC IESVAASMAS VICMAFDTVI MPSNAFLMIH SNWGGAVGTA
DDLREYADLL DKWRSSMGKA YQDKAAGKLS DEQLAQFFKE DTWLTAQEAV ALGLADEVIE
PMQMAASIDF KRLKDFNNMP KAMQTLLQQQ ANVGETPTAA TTAPTTTAPA AAVPPTTPAA
VQPDAATIQA AAIAFNSERM KGINTAFAFF PELADLHNQC IADANINAEK AKDLILAKLG
ENTTPCATLP RTSVHSGNGN IVGDSIRAQL LTRAGHAERE ESNAYASYNL RDLARASLTD
RGIGVSGMNP LQMVGLAFTH SSSDFGNILL DIANKSVLMG WETAEETFEL WTKKGQLGDF
KIAQRVGLGD FNSLRQVREG AEYKYVTVGD HAQQIALATY GELFSITRQA IINDDMSMLT
DIPMKMGFAA KGTIGDLVYA VLTQNPKMAD GKALFHADHG NLGSGAPSVA AIDANRMLMR
KQKSGNRSLN IRPEFVLCPV GLETTMNQII KSSSVKGADV NSGIVNPIQN FAEVIGEPRL
DDSSATQWFL AAGKGRDTIE VAYLDGIDTP YIEQQQGFTI DGVATKVRID AGVAPLDHRG
LVKSTGV
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